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INDEXED
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MeasurementSet
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IGVFDS4090VRQX
IGVFDS4090VRQX
released
Json view
File Set Type
experimental data
Summary
snMCT-seq
Assay Term
single-nucleus methylcytosine and transcriptome sequencing assay
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 7 days
Protocols
https://www.protocols.io/view/snmcat-v2-x54v9jby1g3e/v2
Aliases
chongyuan-luo:pgp_snmct_C38_day7
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
8 items
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0704MNGS
fastq
reads
R1
1
Illumina NovaSeq X
3
5.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI1225VTTI
fastq
reads
R1
1
Illumina NovaSeq X
4
5.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI1745KHBV
fastq
reads
R2
2
Illumina NovaSeq X
3
5.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI2139OMSV
fastq
reads
R2
2
Illumina NovaSeq X
4
5.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI5330ZYNN
fastq
reads
R2
2
Illumina NovaSeq X
2
5.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI5393OJCO
fastq
reads
R1
1
Illumina NovaSeq X
1
5.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI7317ATHC
fastq
reads
R2
2
Illumina NovaSeq X
1
5.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI7965ITKZ
fastq
reads
R1
1
Illumina NovaSeq X
2
5.5 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM3163XGNL
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 7 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO2328XGNY
chongyuan-luo:C38
unspecified
Homo sapiens