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IGVFDS4024PLUG

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File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples
Protocols
Aliases
igvf:corces_measurementSet_RP001_G2_RNA
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Results (Illumina)

16 items
Read Names
fastq
reads
R2
1
Read 2
223JJGLT3
2
1.7 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R1
1
Read 1
223JJGLT3
1
786 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
223JJGLT3
3
269 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I1
1
223JJGLT3
4
289 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R1
1
Read 1
223JJGLT3
4
881 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
223JJGLT3
4
269 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R1
1
Read 1
223JJGLT3
3
878 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
223JJGLT3
2
257 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I1
1
223JJGLT3
2
276 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R1
1
Read 1
223JJGLT3
2
811 MB
Ryan Corces, Gladstone Institute UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples

Donors

12 items
Aliases
  • igvf:corces_donor_BANN0218
male
Homo sapiens
  • igvf:corces_donor_BANN1750
male
Homo sapiens
  • igvf:corces_donor_BANN0215
female
Homo sapiens
  • igvf:corces_donor_BANN1063
male
Homo sapiens
  • igvf:corces_donor_BANN0129
male
Homo sapiens
  • igvf:corces_donor_BANN2057
male
Homo sapiens
  • igvf:corces_donor_BANN1858
male
Homo sapiens
  • igvf:corces_donor_BANN1814
male
Homo sapiens
  • igvf:corces_donor_BANN0124
male
Homo sapiens
  • igvf:corces_donor_BANN0210
male
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_RP001_G2_ATAC
Ryan Corces, Gladstone Institute UCSF