IGVFDS4015XFCR

1{
2    "@context": "/terms/",
3    "@id": "/measurement-sets/IGVFDS4015XFCR/",
4    "@type": [
5        "MeasurementSet",
6        "FileSet",
7        "Item"
8    ],
9    "accession": "IGVFDS4015XFCR",
10    "aliases": [
11        "ali-mortazavi:005_67H_illumina"
12    ],
13    "assay_term": {
14        "@id": "/assay-terms/OBI_0003109/",
15        "assay_slims": [
16            "gene expression"
17        ],
18        "status": "released",
19        "term_name": "single-nucleus RNA sequencing assay"
20    },
21    "audit": {
22        "INTERNAL_ACTION": [
23            {
24                "category": "mismatched status",
25                "detail": "Released multiplexed sample [IGVFSM3290PILO](/multiplexed-samples/IGVFSM3290PILO/) has in progress subobject tabular file [IGVFFI2030VAID](/tabular-files/IGVFFI2030VAID/).",
26                "level": 30,
27                "level_name": "INTERNAL_ACTION",
28                "name": "audit_item_status",
29                "path": "/multiplexed-samples/IGVFSM3290PILO/"
30            },
31            {
32                "category": "missing publication",
33                "detail": "Multiplexed sample [IGVFSM3290PILO](/multiplexed-samples/IGVFSM3290PILO/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
34                "level": 30,
35                "level_name": "INTERNAL_ACTION",
36                "name": "audit_sample_missing_publication",
37                "path": "/multiplexed-samples/IGVFSM3290PILO/"
38            },
39            {
40                "category": "missing publication",
41                "detail": "Measurement set [IGVFDS4015XFCR](/measurement-sets/IGVFDS4015XFCR/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
42                "level": 30,
43                "level_name": "INTERNAL_ACTION",
44                "name": "audit_file_set_missing_publication",
45                "path": "/measurement-sets/IGVFDS4015XFCR/"
46            },
47            {
48                "category": "mismatched status",
49                "detail": "Released measurement set [IGVFDS4015XFCR](/measurement-sets/IGVFDS4015XFCR/) has in progress subobject tabular file [IGVFFI1138MCVX](/tabular-files/IGVFFI1138MCVX/).",
50                "level": 30,
51                "level_name": "INTERNAL_ACTION",
52                "name": "audit_item_status",
53                "path": "/measurement-sets/IGVFDS4015XFCR/"
54            },
55            {
56                "category": "mismatched status",
57                "detail": "Released measurement set [IGVFDS4015XFCR](/measurement-sets/IGVFDS4015XFCR/) has in progress subobject tabular file [IGVFFI2591OFQO](/tabular-files/IGVFFI2591OFQO/).",
58                "level": 30,
59                "level_name": "INTERNAL_ACTION",
60                "name": "audit_item_status",
61                "path": "/measurement-sets/IGVFDS4015XFCR/"
62            }
63        ]
64    },
65    "award": {
66        "@id": "/awards/HG012077/",
67        "component": "mapping",
68        "contact_pi": {
69            "@id": "/users/2c33e192-e815-4384-a220-72a0992cbe24/",
70            "title": "Ali Mortazavi"
71        },
72        "title": "Center for Mouse Genomic Variation at Single Cell Resolution"
73    },
74    "control_for": [],
75    "creation_timestamp": "2023-10-07T02:05:37.483291+00:00",
76    "data_use_limitation_summaries": [
77        "no certificate"
78    ],
79    "donors": [
80        {
81            "@id": "/rodent-donors/IGVFDO7062NBTQ/",
82            "accession": "IGVFDO7062NBTQ",
83            "aliases": [
84                "ali-mortazavi:079_PWKJ_10M"
85            ],
86            "sex": "male",
87            "status": "released",
88            "strain_background": "PWK/PhJ (PWK)",
89            "taxa": "Mus musculus"
90        },
91        {
92            "@id": "/rodent-donors/IGVFDO5177QEWF/",
93            "accession": "IGVFDO5177QEWF",
94            "aliases": [
95                "ali-mortazavi:063_WSBJ_10M"
96            ],
97            "sex": "male",
98            "status": "released",
99            "strain_background": "WSB/EiJ (WSB)",
100            "taxa": "Mus musculus"
101        },
102        {
103            "@id": "/rodent-donors/IGVFDO5183UZGS/",
104            "accession": "IGVFDO5183UZGS",
105            "aliases": [
106                "ali-mortazavi:021_B6J_10M"
107            ],
108            "sex": "male",
109            "status": "released",
110            "strain_background": "C57BL/6J (B6)",
111            "taxa": "Mus musculus"
112        },
113        {
114            "@id": "/rodent-donors/IGVFDO5539RLXJ/",
115            "accession": "IGVFDO5539RLXJ",
116            "aliases": [
117                "ali-mortazavi:029_AJ_10M"
118            ],
119            "sex": "male",
120            "status": "released",
121            "strain_background": "A/J (AJ)",
122            "taxa": "Mus musculus"
123        },
124        {
125            "@id": "/rodent-donors/IGVFDO4707SGWM/",
126            "accession": "IGVFDO4707SGWM",
127            "aliases": [
128                "ali-mortazavi:051_NZOJ_10M"
129            ],
130            "sex": "male",
131            "status": "released",
132            "strain_background": "NZO/H1LtJ (NZO)",
133            "taxa": "Mus musculus"
134        },
135        {
136            "@id": "/rodent-donors/IGVFDO5085MJSP/",
137            "accession": "IGVFDO5085MJSP",
138            "aliases": [
139                "ali-mortazavi:048_NZOJ_10F"
140            ],
141            "sex": "female",
142            "status": "released",
143            "strain_background": "NZO/H1LtJ (NZO)",
144            "taxa": "Mus musculus"
145        },
146        {
147            "@id": "/rodent-donors/IGVFDO4725SNCJ/",
148            "accession": "IGVFDO4725SNCJ",
149            "aliases": [
150                "ali-mortazavi:017_B6J_10M"
151            ],
152            "sex": "male",
153            "status": "released",
154            "strain_background": "C57BL/6J (B6)",
155            "taxa": "Mus musculus"
156        },
157        {
158            "@id": "/rodent-donors/IGVFDO3534MDFF/",
159            "accession": "IGVFDO3534MDFF",
160            "aliases": [
161                "ali-mortazavi:046_NZOJ_10F"
162            ],
163            "sex": "female",
164            "status": "released",
165            "strain_background": "NZO/H1LtJ (NZO)",
166            "taxa": "Mus musculus"
167        },
168        {
169            "@id": "/rodent-donors/IGVFDO5872DFML/",
170            "accession": "IGVFDO5872DFML",
171            "aliases": [
172                "ali-mortazavi:094_CASTJ_10F"
173            ],
174            "sex": "female",
175            "status": "released",
176            "strain_background": "CAST/EiJ (CAST)",
177            "taxa": "Mus musculus"
178        },
179        {
180            "@id": "/rodent-donors/IGVFDO8152XDDC/",
181            "accession": "IGVFDO8152XDDC",
182            "aliases": [
183                "ali-mortazavi:090_CASTJ_10F"
184            ],
185            "sex": "female",
186            "status": "released",
187            "strain_background": "CAST/EiJ (CAST)",
188            "taxa": "Mus musculus"
189        },
190        {
191            "@id": "/rodent-donors/IGVFDO2106EEWB/",
192            "accession": "IGVFDO2106EEWB",
193            "aliases": [
194                "ali-mortazavi:078_PWKJ_10F"
195            ],
196            "sex": "female",
197            "status": "released",
198            "strain_background": "PWK/PhJ (PWK)",
199            "taxa": "Mus musculus"
200        },
201        {
202            "@id": "/rodent-donors/IGVFDO5502NJPS/",
203            "accession": "IGVFDO5502NJPS",
204            "aliases": [
205                "ali-mortazavi:038_129S1J_10F"
206            ],
207            "sex": "female",
208            "status": "released",
209            "strain_background": "129S1/SvImJ (129)",
210            "taxa": "Mus musculus"
211        },
212        {
213            "@id": "/rodent-donors/IGVFDO7951JDSP/",
214            "accession": "IGVFDO7951JDSP",
215            "aliases": [
216                "ali-mortazavi:026_AJ_10F"
217            ],
218            "sex": "female",
219            "status": "released",
220            "strain_background": "A/J (AJ)",
221            "taxa": "Mus musculus"
222        },
223        {
224            "@id": "/rodent-donors/IGVFDO0681EHNP/",
225            "accession": "IGVFDO0681EHNP",
226            "aliases": [
227                "ali-mortazavi:052_NZOJ_10F"
228            ],
229            "sex": "female",
230            "status": "released",
231            "strain_background": "NZO/H1LtJ (NZO)",
232            "taxa": "Mus musculus"
233        },
234        {
235            "@id": "/rodent-donors/IGVFDO6112GRYR/",
236            "accession": "IGVFDO6112GRYR",
237            "aliases": [
238                "ali-mortazavi:059_WSBJ_10M"
239            ],
240            "sex": "male",
241            "status": "released",
242            "strain_background": "WSB/EiJ (WSB)",
243            "taxa": "Mus musculus"
244        },
245        {
246            "@id": "/rodent-donors/IGVFDO6219LVKW/",
247            "accession": "IGVFDO6219LVKW",
248            "aliases": [
249                "ali-mortazavi:032_AJ_10F"
250            ],
251            "sex": "female",
252            "status": "released",
253            "strain_background": "A/J (AJ)",
254            "taxa": "Mus musculus"
255        },
256        {
257            "@id": "/rodent-donors/IGVFDO9510ILZG/",
258            "accession": "IGVFDO9510ILZG",
259            "aliases": [
260                "ali-mortazavi:053_NZOJ_10M"
261            ],
262            "sex": "male",
263            "status": "released",
264            "strain_background": "NZO/H1LtJ (NZO)",
265            "taxa": "Mus musculus"
266        },
267        {
268            "@id": "/rodent-donors/IGVFDO0430HQIU/",
269            "accession": "IGVFDO0430HQIU",
270            "aliases": [
271                "ali-mortazavi:041_129S1J_10M"
272            ],
273            "sex": "male",
274            "status": "released",
275            "strain_background": "129S1/SvImJ (129)",
276            "taxa": "Mus musculus"
277        },
278        {
279            "@id": "/rodent-donors/IGVFDO3436ZMLY/",
280            "accession": "IGVFDO3436ZMLY",
281            "aliases": [
282                "ali-mortazavi:091_CASTJ_10M"
283            ],
284            "sex": "male",
285            "status": "released",
286            "strain_background": "CAST/EiJ (CAST)",
287            "taxa": "Mus musculus"
288        },
289        {
290            "@id": "/rodent-donors/IGVFDO3640WUBU/",
291            "accession": "IGVFDO3640WUBU",
292            "aliases": [
293                "ali-mortazavi:066_NODJ_10F"
294            ],
295            "sex": "female",
296            "status": "released",
297            "strain_background": "NOD/ShiLtJ (NOD)",
298            "taxa": "Mus musculus"
299        },
300        {
301            "@id": "/rodent-donors/IGVFDO3662UKFW/",
302            "accession": "IGVFDO3662UKFW",
303            "aliases": [
304                "ali-mortazavi:087_CASTJ_10M"
305            ],
306            "sex": "male",
307            "status": "released",
308            "strain_background": "CAST/EiJ (CAST)",
309            "taxa": "Mus musculus"
310        },
311        {
312            "@id": "/rodent-donors/IGVFDO0026YRCR/",
313            "accession": "IGVFDO0026YRCR",
314            "aliases": [
315                "ali-mortazavi:018_B6J_10F"
316            ],
317            "sex": "female",
318            "status": "released",
319            "strain_background": "C57BL/6J (B6)",
320            "taxa": "Mus musculus"
321        },
322        {
323            "@id": "/rodent-donors/IGVFDO9142EUBJ/",
324            "accession": "IGVFDO9142EUBJ",
325            "aliases": [
326                "ali-mortazavi:096_WSBJ_10F"
327            ],
328            "sex": "female",
329            "status": "released",
330            "strain_background": "WSB/EiJ (WSB)",
331            "taxa": "Mus musculus"
332        },
333        {
334            "@id": "/rodent-donors/IGVFDO1452VDIT/",
335            "accession": "IGVFDO1452VDIT",
336            "aliases": [
337                "ali-mortazavi:035_AJ_10M"
338            ],
339            "sex": "male",
340            "status": "released",
341            "strain_background": "A/J (AJ)",
342            "taxa": "Mus musculus"
343        },
344        {
345            "@id": "/rodent-donors/IGVFDO3207TERA/",
346            "accession": "IGVFDO3207TERA",
347            "aliases": [
348                "ali-mortazavi:086_CASTJ_10F"
349            ],
350            "sex": "female",
351            "status": "released",
352            "strain_background": "CAST/EiJ (CAST)",
353            "taxa": "Mus musculus"
354        },
355        {
356            "@id": "/rodent-donors/IGVFDO1643VEDI/",
357            "accession": "IGVFDO1643VEDI",
358            "aliases": [
359                "ali-mortazavi:019_B6J_10M"
360            ],
361            "sex": "male",
362            "status": "released",
363            "strain_background": "C57BL/6J (B6)",
364            "taxa": "Mus musculus"
365        },
366        {
367            "@id": "/rodent-donors/IGVFDO4469VYEZ/",
368            "accession": "IGVFDO4469VYEZ",
369            "aliases": [
370                "ali-mortazavi:073_NODJ_10M"
371            ],
372            "sex": "male",
373            "status": "released",
374            "strain_background": "NOD/ShiLtJ (NOD)",
375            "taxa": "Mus musculus"
376        },
377        {
378            "@id": "/rodent-donors/IGVFDO6066JIEJ/",
379            "accession": "IGVFDO6066JIEJ",
380            "aliases": [
381                "ali-mortazavi:043_129S1J_10M"
382            ],
383            "sex": "male",
384            "status": "released",
385            "strain_background": "129S1/SvImJ (129)",
386            "taxa": "Mus musculus"
387        },
388        {
389            "@id": "/rodent-donors/IGVFDO6141KSSQ/",
390            "accession": "IGVFDO6141KSSQ",
391            "aliases": [
392                "ali-mortazavi:024_B6J_10F"
393            ],
394            "sex": "female",
395            "status": "released",
396            "strain_background": "C57BL/6J (B6)",
397            "taxa": "Mus musculus"
398        },
399        {
400            "@id": "/rodent-donors/IGVFDO5523UFUN/",
401            "accession": "IGVFDO5523UFUN",
402            "aliases": [
403                "ali-mortazavi:070_NODJ_10F"
404            ],
405            "sex": "female",
406            "status": "released",
407            "strain_background": "NOD/ShiLtJ (NOD)",
408            "taxa": "Mus musculus"
409        },
410        {
411            "@id": "/rodent-donors/IGVFDO2301HIUQ/",
412            "accession": "IGVFDO2301HIUQ",
413            "aliases": [
414                "ali-mortazavi:067_NODJ_10M"
415            ],
416            "sex": "male",
417            "status": "released",
418            "strain_background": "NOD/ShiLtJ (NOD)",
419            "taxa": "Mus musculus"
420        },
421        {
422            "@id": "/rodent-donors/IGVFDO1477BPVO/",
423            "accession": "IGVFDO1477BPVO",
424            "aliases": [
425                "ali-mortazavi:088_CASTJ_10F"
426            ],
427            "sex": "female",
428            "status": "released",
429            "strain_background": "CAST/EiJ (CAST)",
430            "taxa": "Mus musculus"
431        },
432        {
433            "@id": "/rodent-donors/IGVFDO3655FKMR/",
434            "accession": "IGVFDO3655FKMR",
435            "aliases": [
436                "ali-mortazavi:025_B6J_10M"
437            ],
438            "sex": "male",
439            "status": "released",
440            "strain_background": "C57BL/6J (B6)",
441            "taxa": "Mus musculus"
442        },
443        {
444            "@id": "/rodent-donors/IGVFDO2645GUSC/",
445            "accession": "IGVFDO2645GUSC",
446            "aliases": [
447                "ali-mortazavi:060_WSBJ_10F"
448            ],
449            "sex": "female",
450            "status": "released",
451            "strain_background": "WSB/EiJ (WSB)",
452            "taxa": "Mus musculus"
453        },
454        {
455            "@id": "/rodent-donors/IGVFDO2831PZHE/",
456            "accession": "IGVFDO2831PZHE",
457            "aliases": [
458                "ali-mortazavi:077_PWKJ_10M"
459            ],
460            "sex": "male",
461            "status": "released",
462            "strain_background": "PWK/PhJ (PWK)",
463            "taxa": "Mus musculus"
464        },
465        {
466            "@id": "/rodent-donors/IGVFDO7007WBAX/",
467            "accession": "IGVFDO7007WBAX",
468            "aliases": [
469                "ali-mortazavi:016_B6J_10F"
470            ],
471            "sex": "female",
472            "status": "released",
473            "strain_background": "C57BL/6J (B6)",
474            "taxa": "Mus musculus"
475        },
476        {
477            "@id": "/rodent-donors/IGVFDO0813DZTW/",
478            "accession": "IGVFDO0813DZTW",
479            "aliases": [
480                "ali-mortazavi:069_NODJ_10M"
481            ],
482            "sex": "male",
483            "status": "released",
484            "strain_background": "NOD/ShiLtJ (NOD)",
485            "taxa": "Mus musculus"
486        },
487        {
488            "@id": "/rodent-donors/IGVFDO0853BCOL/",
489            "accession": "IGVFDO0853BCOL",
490            "aliases": [
491                "ali-mortazavi:058_WSBJ_10F"
492            ],
493            "sex": "female",
494            "status": "released",
495            "strain_background": "WSB/EiJ (WSB)",
496            "taxa": "Mus musculus"
497        },
498        {
499            "@id": "/rodent-donors/IGVFDO7610XXRR/",
500            "accession": "IGVFDO7610XXRR",
501            "aliases": [
502                "ali-mortazavi:072_NODJ_10F"
503            ],
504            "sex": "female",
505            "status": "released",
506            "strain_background": "NOD/ShiLtJ (NOD)",
507            "taxa": "Mus musculus"
508        },
509        {
510            "@id": "/rodent-donors/IGVFDO8958JQIY/",
511            "accession": "IGVFDO8958JQIY",
512            "aliases": [
513                "ali-mortazavi:047_NZOJ_10M"
514            ],
515            "sex": "male",
516            "status": "released",
517            "strain_background": "NZO/H1LtJ (NZO)",
518            "taxa": "Mus musculus"
519        },
520        {
521            "@id": "/rodent-donors/IGVFDO9199TPBC/",
522            "accession": "IGVFDO9199TPBC",
523            "aliases": [
524                "ali-mortazavi:071_NODJ_10M"
525            ],
526            "sex": "male",
527            "status": "released",
528            "strain_background": "NOD/ShiLtJ (NOD)",
529            "taxa": "Mus musculus"
530        },
531        {
532            "@id": "/rodent-donors/IGVFDO9340WGNV/",
533            "accession": "IGVFDO9340WGNV",
534            "aliases": [
535                "ali-mortazavi:037_129S1J_10M"
536            ],
537            "sex": "male",
538            "status": "released",
539            "strain_background": "129S1/SvImJ (129)",
540            "taxa": "Mus musculus"
541        },
542        {
543            "@id": "/rodent-donors/IGVFDO1744FDIX/",
544            "accession": "IGVFDO1744FDIX",
545            "aliases": [
546                "ali-mortazavi:036_129S1J_10F"
547            ],
548            "sex": "female",
549            "status": "released",
550            "strain_background": "129S1/SvImJ (129)",
551            "taxa": "Mus musculus"
552        },
553        {
554            "@id": "/rodent-donors/IGVFDO2292YGGE/",
555            "accession": "IGVFDO2292YGGE",
556            "aliases": [
557                "ali-mortazavi:049_NZOJ_10M"
558            ],
559            "sex": "male",
560            "status": "released",
561            "strain_background": "NZO/H1LtJ (NZO)",
562            "taxa": "Mus musculus"
563        },
564        {
565            "@id": "/rodent-donors/IGVFDO3762EAWT/",
566            "accession": "IGVFDO3762EAWT",
567            "aliases": [
568                "ali-mortazavi:076_PWKJ_10F"
569            ],
570            "sex": "female",
571            "status": "released",
572            "strain_background": "PWK/PhJ (PWK)",
573            "taxa": "Mus musculus"
574        },
575        {
576            "@id": "/rodent-donors/IGVFDO5258MBVH/",
577            "accession": "IGVFDO5258MBVH",
578            "aliases": [
579                "ali-mortazavi:040_129S1J_10F"
580            ],
581            "sex": "female",
582            "status": "released",
583            "strain_background": "129S1/SvImJ (129)",
584            "taxa": "Mus musculus"
585        },
586        {
587            "@id": "/rodent-donors/IGVFDO9202WGJZ/",
588            "accession": "IGVFDO9202WGJZ",
589            "aliases": [
590                "ali-mortazavi:085_PWKJ_10M"
591            ],
592            "sex": "male",
593            "status": "released",
594            "strain_background": "PWK/PhJ (PWK)",
595            "taxa": "Mus musculus"
596        },
597        {
598            "@id": "/rodent-donors/IGVFDO9890MXGN/",
599            "accession": "IGVFDO9890MXGN",
600            "aliases": [
601                "ali-mortazavi:068_NODJ_10F"
602            ],
603            "sex": "female",
604            "status": "released",
605            "strain_background": "NOD/ShiLtJ (NOD)",
606            "taxa": "Mus musculus"
607        },
608        {
609            "@id": "/rodent-donors/IGVFDO9560CEGZ/",
610            "accession": "IGVFDO9560CEGZ",
611            "aliases": [
612                "ali-mortazavi:061_WSBJ_10M"
613            ],
614            "sex": "male",
615            "status": "released",
616            "strain_background": "WSB/EiJ (WSB)",
617            "taxa": "Mus musculus"
618        },
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1132        {
1133            "@id": "/configuration-files/IGVFFI7395KWCW/",
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1145        {
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1148            "content_type": "seqspec",
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1156            "upload_status": "validated"
1157        },
1158        {
1159            "@id": "/configuration-files/IGVFFI5116WCCW/",
1160            "accession": "IGVFFI5116WCCW",
1161            "content_type": "seqspec",
1162            "creation_timestamp": "2024-09-17T22:42:31.171738+00:00",
1163            "file_format": "yaml",
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1169            "upload_status": "validated"
1170        },
1171        {
1172            "@id": "/configuration-files/IGVFFI1062FDNU/",
1173            "accession": "IGVFFI1062FDNU",
1174            "content_type": "seqspec",
1175            "creation_timestamp": "2024-09-17T22:42:34.882827+00:00",
1176            "file_format": "yaml",
1177            "file_size": 1352,
1178            "href": "/configuration-files/IGVFFI1062FDNU/@@download/IGVFFI1062FDNU.yaml.gz",
1179            "md5sum": "02442ee8bf7f57374ed39434b4cae288",
1180            "s3_uri": "s3://igvf-files/2024/09/17/dde15883-46e3-431c-ba81-33cd8f315bfd/IGVFFI1062FDNU.yaml.gz",
1181            "status": "released",
1182            "upload_status": "validated"
1183        },
1184        {
1185            "@id": "/configuration-files/IGVFFI9266TIKD/",
1186            "accession": "IGVFFI9266TIKD",
1187            "content_type": "seqspec",
1188            "creation_timestamp": "2024-09-17T22:42:30.000275+00:00",
1189            "file_format": "yaml",
1190            "file_size": 1351,
1191            "href": "/configuration-files/IGVFFI9266TIKD/@@download/IGVFFI9266TIKD.yaml.gz",
1192            "md5sum": "a028f9f4db4051ee21f3c210d9ea342b",
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1194            "status": "released",
1195            "upload_status": "validated"
1196        },
1197        {
1198            "@id": "/configuration-files/IGVFFI0873GIAT/",
1199            "accession": "IGVFFI0873GIAT",
1200            "content_type": "seqspec",
1201            "creation_timestamp": "2024-09-17T22:42:33.613714+00:00",
1202            "file_format": "yaml",
1203            "file_size": 1349,
1204            "href": "/configuration-files/IGVFFI0873GIAT/@@download/IGVFFI0873GIAT.yaml.gz",
1205            "md5sum": "e9a668352baca07ab883aa02489c07b4",
1206            "s3_uri": "s3://igvf-files/2024/09/17/27597502-4a68-4e11-8f45-ab321b8d0aa5/IGVFFI0873GIAT.yaml.gz",
1207            "status": "released",
1208            "upload_status": "validated"
1209        },
1210        {
1211            "@id": "/configuration-files/IGVFFI7106FXAG/",
1212            "accession": "IGVFFI7106FXAG",
1213            "content_type": "seqspec",
1214            "creation_timestamp": "2024-09-17T22:42:36.062424+00:00",
1215            "file_format": "yaml",
1216            "file_size": 1351,
1217            "href": "/configuration-files/IGVFFI7106FXAG/@@download/IGVFFI7106FXAG.yaml.gz",
1218            "md5sum": "2b5eda60a72922e10b8b6f911268a661",
1219            "s3_uri": "s3://igvf-files/2024/09/17/1a2edfde-7d43-4314-a7d5-b420c8513764/IGVFFI7106FXAG.yaml.gz",
1220            "status": "released",
1221            "upload_status": "validated"
1222        }
1223    ],
1224    "input_for": [
1225        "/analysis-sets/IGVFDS5287IDYR/"
1226    ],
1227    "lab": {
1228        "@id": "/labs/ali-mortazavi/",
1229        "title": "Ali Mortazavi, UCI"
1230    },
1231    "notes": "Preferred_assay_titles enum Parse Split-seq has been renamed to be Parse SPLiT-seq.",
1232    "onlist_files": [
1233        "/tabular-files/IGVFFI2591OFQO/",
1234        "/tabular-files/IGVFFI1138MCVX/"
1235    ],
1236    "onlist_method": "multi",
1237    "preferred_assay_title": "Parse SPLiT-seq",
1238    "protocols": [
1239        "https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-flash-froz-n92ldm8b8l5b/v2",
1240        "https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-flash-froz-kxygx396zg8j/v2",
1241        "https://www.protocols.io/view/evercode-wt-mega-v2-2-1-8epv5xxrng1b/v1",
1242        "https://www.protocols.io/view/evercode-single-index-pcr-5jyl82k9rl2w/v1"
1243    ],
1244    "release_timestamp": "2025-04-18T23:28:23.944367+00:00",
1245    "samples": [
1246        {
1247            "@id": "/multiplexed-samples/IGVFSM3290PILO/",
1248            "@type": [
1249                "MultiplexedSample",
1250                "Sample",
1251                "Item"
1252            ],
1253            "accession": "IGVFSM3290PILO",
1254            "aliases": [
1255                "ali-mortazavi:subpool_005_67H"
1256            ],
1257            "cellular_sub_pool": "005_67H",
1258            "classifications": [
1259                "tissue",
1260                "multiplexed sample"
1261            ],
1262            "disease_terms": [],
1263            "institutional_certificates": [],
1264            "modifications": [],
1265            "sample_terms": [
1266                {
1267                    "@id": "/sample-terms/UBERON_0000007/",
1268                    "@type": [
1269                        "SampleTerm",
1270                        "OntologyTerm",
1271                        "Item"
1272                    ],
1273                    "status": "released",
1274                    "summary": "pituitary gland",
1275                    "term_name": "pituitary gland"
1276                },
1277                {
1278                    "@id": "/sample-terms/UBERON_0001898/",
1279                    "@type": [
1280                        "SampleTerm",
1281                        "OntologyTerm",
1282                        "Item"
1283                    ],
1284                    "status": "released",
1285                    "summary": "hypothalamus",
1286                    "term_name": "hypothalamus"
1287                },
1288                {
1289                    "@id": "/sample-terms/UBERON_0002107/",
1290                    "@type": [
1291                        "SampleTerm",
1292                        "OntologyTerm",
1293                        "Item"
1294                    ],
1295                    "status": "released",
1296                    "summary": "liver",
1297                    "term_name": "liver"
1298                }
1299            ],
1300            "status": "released",
1301            "summary": "multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 190 more samples",
1302            "taxa": "Mus musculus",
1303            "treatments": []
1304        }
1305    ],
1306    "schema_version": "26",
1307    "sequencing_library_types": [
1308        "mRNA enriched"
1309    ],
1310    "status": "released",
1311    "strand_specificity": "5 prime to 3 prime",
1312    "submitted_by": {
1313        "@id": "/users/ebd1025b-e3ab-4e51-bfcd-1415f278281a/",
1314        "title": "Diane Trout"
1315    },
1316    "submitted_files_timestamp": "2023-10-07T17:07:54.261955+00:00",
1317    "summary": "Parse SPLiT-seq",
1318    "uuid": "56e0fa2f-ca85-4e53-843a-9d36a3c2b43b"
1319}