IGVFDS3856ZADL

released

File Set Type

experimental data

Summary

CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci

Assay Term

in vitro CRISPR screen using flow cytometry

Targeted Genes

MYC

Sample Summaries

HCT116 cell line, male, Homo sapiens (sorting details: FACS bin A for 0-10% expression of MYC) modified with a guide library

Construct Library Sets

IGVFDS7857SYCK Guide (sgRNA) library targeting accessible genome regions in many genomic loci

Protocols

https://www.protocols.io/view/crispri-of-regulatory-elements-upon-degron-operati-5jyl82d59l2w/v1

Aliases

jesse-engreitz:measurement_CRUDO_MYC-Auxin0hrs-FF2-BinA-PCR1_Rep1_S25

jesse-engreitz:measurement_CRUDO_MYC-Auxin0hrs-FF2-BinA-PCR1_Rep2_S80

jesse-engreitz:measurement_CRUDO_MYC-Auxin0hrs-FF2-BinA-PCR2_Rep1_S31

jesse-engreitz:measurement_CRUDO_MYC-Auxin0hrs-FF2-BinA-PCR2_Rep2_S86

jesse-engreitz:measurement_CRUDO_MYC-Auxin0hrs-FF2-BinA-PCR3_Rep1_S37

jesse-engreitz:measurement_CRUDO_MYC-Auxin0hrs-FF2-BinA-PCR3_Rep2_S92

jesse-engreitz:measurement_CRUDO_MYC-Auxin0hrs-FF2-BinA-PCR4_Rep1_S43

jesse-engreitz:measurement_CRUDO_MYC-Auxin0hrs-FF2-BinA-PCR4_Rep2_S98

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM6871QVFB

InVitroSystem

HCT116

HCT116 cell line, male, Homo sapiens (sorting details: FACS bin A for 0-10% expression of MYC) modified with a guide library

Donors

1 item

Accession

Aliases

Sex

Taxa

IGVFDO0384OZRW

igvf:donor_of_HCT116

male

Homo sapiens

Auxiliary Datasets

2 items

Files

IGVFDS8214HXSU

AuxiliarySet

cell sorting for CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, CRISPR interference FlowFISH screen integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci, ... and 4 more measurement sets

IGVFFI3328SYVP