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IGVFDS3810SJRN

released
File Set Type
experimental data
Control Type
control transduction
Summary
control transduction ATAC-seq integrating a control transduction expression vector library
Assay Term
bulk assay for transposase-accessible chromatin using sequencing
Sample Summaries
  • CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library
Protocols
Aliases
charles-gersbach:cd8-tcells-atac-seq-chronic-activation-gfp-rep1
Publications

Sequencing Results (Illumina)

2 items
Read Names
fastq
reads
R1
1
1
1.2 GB
Charles Gersbach, Duke
validated
fastq
reads
R2
1
1
1.3 GB
Charles Gersbach, Duke
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library

Donors

1 item
Accession
Aliases
Sex
Taxa
  • charles-gersbach:cd8-tcells-donor-9
unspecified
Homo sapiens

Associated Construct Library Sets

1 item
Accession
Summary
Library Design Files
control transduction expression vector library

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
ATAC-seq: alignments, fold change over control, peak quantifications
  • charles-gersbach:cd8-tcells-analysis-set-atac-seq-chronic-activation-batf3
Charles Gersbach, Duke

File Sets Controlled by This Measurement Set

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
ATAC-seq integrating an expression vector library of BATF3
  • charles-gersbach:cd8-tcells-atac-seq-chronic-activation-batf3-rep1
Charles Gersbach, Duke

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke