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IGVFDS3777TUPG

released
GRU
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 206)
Protocols
Aliases
buenrostro-bernstein:scRNA Lib 385
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
R1
3989
Read 1
22523KLT3
719 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3989
Read 2
22523KLT3
353 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3953
Read 2
22523KLT3
323 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3989
Barcode index
22523KLT3
271 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3953
Barcode index
22523KLT3
251 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
3953
Read 1
22523KLT3
664 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 206)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:scATAC Lib 594
Jason Buenrostro, Broad