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INDEXED
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MeasurementSet
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IGVFDS3755JEOE
IGVFDS3755JEOE
released
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File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens (59 years) fibroblast cell
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C37_day0
Submitter Comment
This file set previously linked to the Sample /in-vitro-systems/IGVFSM9498BCKY/.
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0245QLLC
fastq
reads
R2
1
Illumina NovaSeq X
5
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI1542EJLW
fastq
reads
R1
1
Illumina NovaSeq X
5
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI1552AZYL
fastq
reads
R1
1
Illumina NovaSeq X
4
2.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI1586JSUF
fastq
reads
R1
1
Illumina NovaSeq X
7
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI1822XNVN
fastq
reads
R1
1
Illumina NovaSeq X
8
2.5 GB
Chongyuan Luo, UCLA
validated
IGVFFI3268BGCS
fastq
reads
R2
1
Illumina NovaSeq X
6
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI3415SOSI
fastq
reads
R1
1
Illumina NovaSeq X
2
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI3941UJIX
fastq
reads
R1
1
Illumina NovaSeq X
6
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI4260EYNC
fastq
reads
R2
1
Illumina NovaSeq X
1
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI4644CNSY
fastq
reads
R2
1
Illumina NovaSeq X
4
2.6 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM0025OPEX
PrimaryCell
fibroblast
Homo sapiens (59 years) fibroblast cell
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO0351NYZH
chongyuan-luo:C37
unspecified
Homo sapiens