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IGVFDS3694PHQU

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 205)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 587
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

21 items
Read Names
fastq
reads
R1
4080
Read 1
22523KLT3
570 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1001
Read 2
22773CLT3
242 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
959
Read 1
22773CLT3
541 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4008
Read 2
22523KLT3
250 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1043
Read 1
22773CLT3
546 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4080
Read 2
22523KLT3
258 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1001
Barcode index
22773CLT3
262 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1085
Read 2
22773CLT3
242 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4008
Barcode index
22523KLT3
260 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1001
Read 1
22773CLT3
547 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 205)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 456
Jason Buenrostro, Broad