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IGVFDS3673RLHA

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 208)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 601
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
I1
8711
Barcode index
22LMVNLT4
276 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8999
Read 2
22LMVNLT4
426 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8615
Read 1
22LMVNLT4
463 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8903
Barcode index
22LMVNLT4
272 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8807
Barcode index
22LMVNLT4
272 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8711
Read 2
22LMVNLT4
458 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8711
Read 1
22LMVNLT4
468 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4371
Barcode index
H75F7DSX5
487 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8903
Read 2
22LMVNLT4
452 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9095
Read 2
22LMVNLT4
443 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 208)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 244
Jason Buenrostro, Broad