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IGVFDS3638UVNV

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)
Protocols
Aliases
bradley-bernstein:scATAC Lib 109
buenrostro-bernstein:scATAC Lib 109
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R2
243
Read 2, Barcode index
411 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
243
Read 1
231 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
43
Read 1
232 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
43
Read 2, Barcode index
412 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1503
  • buenrostro-bernstein:Donor 1503
female
Mus musculus

Related Multiome Datasets

5 items
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 111
  • buenrostro-bernstein:scATAC Lib 111
Jason Buenrostro, Broad
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • bradley-bernstein:scATAC Lib 110
  • buenrostro-bernstein:scATAC Lib 110
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 72
  • buenrostro-bernstein:scRNA Lib 72
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 71
  • buenrostro-bernstein:scRNA Lib 71
Jason Buenrostro, Broad
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 70
  • buenrostro-bernstein:scRNA Lib 70
Jason Buenrostro, Broad