IGVFDS3633FCWO

released

GRU

File Set Type

experimental data

Summary

single-cell ATAC-seq (SHARE-seq)

Assay Term

single-cell ATAC-seq

Sample Summaries

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 163)

Protocols

https://www.protocols.io/view/share-seq-protocol-v2-2-di3y4gpw

Aliases

buenrostro-bernstein:scATAC Lib 344

Submitter Comment

Does not have corresponding scRNA seq MeasurementSet due to failed QC

Attribution

Jason Buenrostro, Broad

(

HG011986 — Jason Buenrostro

)

Sequencing Results (Illumina)

3 items

Read Names

IGVFFI1022XOBY

fastq

reads

4415

IGVFFI6635HDXM

Illumina NovaSeq X

22JMFMLT3

5.6 GB

Jason Buenrostro, Broad

validated

IGVFFI3873ANSO

fastq

reads

4415

IGVFFI6635HDXM

Illumina NovaSeq X

22JMFMLT3

5.9 GB

Jason Buenrostro, Broad

validated

IGVFFI9877YMTO

fastq

reads

4415

Barcode index

IGVFFI6635HDXM

Illumina NovaSeq X

22JMFMLT3

3.3 GB

Jason Buenrostro, Broad

validated

Samples

1 item

Accession

Type

Sample Terms

Associated Construct Library Sets

Summary

IGVFSM0461GRJT

InVitroSystem

induced pluripotent stem cell

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 163)