{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS3632OOWJ/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS3632OOWJ",
"aliases": [
"igvf:corces_measurementSet_RP017_G1_RNA"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [8873c4a9-e724-443a-a05e-06e9e0b589d5](/phenotypic-features/8873c4a9-e724-443a-a05e-06e9e0b589d5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [a0192d92-603a-484a-9f0f-36150134dec4](/phenotypic-features/a0192d92-603a-484a-9f0f-36150134dec4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [4d73651a-95b0-453f-bf9e-85a83965b18b](/phenotypic-features/4d73651a-95b0-453f-bf9e-85a83965b18b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [15a2db58-5d04-4278-9bcf-bbb6923e95b2](/phenotypic-features/15a2db58-5d04-4278-9bcf-bbb6923e95b2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [cc4f681e-74b9-4639-96f4-47f5c05c6ff2](/phenotypic-features/cc4f681e-74b9-4639-96f4-47f5c05c6ff2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [e4a3f50a-af00-468e-a649-00d00f9509fa](/phenotypic-features/e4a3f50a-af00-468e-a649-00d00f9509fa/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [774378d7-33a3-4ef6-856c-0ae15de83c29](/phenotypic-features/774378d7-33a3-4ef6-856c-0ae15de83c29/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [bc3ceaf3-1a96-43dc-a6df-678fc3bd5f74](/phenotypic-features/bc3ceaf3-1a96-43dc-a6df-678fc3bd5f74/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [f88331b4-90fa-49b3-82d2-e23fa74c59f5](/phenotypic-features/f88331b4-90fa-49b3-82d2-e23fa74c59f5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [cb20813a-9fc4-42a7-925b-a05ccade9a7a](/phenotypic-features/cb20813a-9fc4-42a7-925b-a05ccade9a7a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [4c25b550-2fa1-4f9c-a4c6-aa047749c900](/phenotypic-features/4c25b550-2fa1-4f9c-a4c6-aa047749c900/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [62744ae9-5ff1-439f-8b3a-adfc0eeb26ad](/phenotypic-features/62744ae9-5ff1-439f-8b3a-adfc0eeb26ad/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [d6fded43-9df2-47be-ba89-6eddc5735c58](/phenotypic-features/d6fded43-9df2-47be-ba89-6eddc5735c58/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [2aa59ffb-56f1-4cc1-9e70-14558ac277ce](/phenotypic-features/2aa59ffb-56f1-4cc1-9e70-14558ac277ce/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [31468a8a-f7b3-450e-8ba0-1d38345e86fa](/phenotypic-features/31468a8a-f7b3-450e-8ba0-1d38345e86fa/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [914b3b0b-909c-4dc4-843a-e573cd4fd215](/phenotypic-features/914b3b0b-909c-4dc4-843a-e573cd4fd215/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [2c7d3588-70c3-4cdf-909f-6063b09b76c4](/phenotypic-features/2c7d3588-70c3-4cdf-909f-6063b09b76c4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8504RBEL](/human-donors/IGVFDO8504RBEL/) has in progress subobject phenotypic feature [fdce3d00-2799-422c-afc2-6258a113b2fa](/phenotypic-features/fdce3d00-2799-422c-afc2-6258a113b2fa/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8504RBEL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [905212f3-9a73-48f8-9d8a-bbf1a29e09c2](/phenotypic-features/905212f3-9a73-48f8-9d8a-bbf1a29e09c2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [9a45b193-acc3-4a31-82a8-09bbb5deb7b8](/phenotypic-features/9a45b193-acc3-4a31-82a8-09bbb5deb7b8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [362f11d9-5071-4bde-9bd2-a81f54c82b95](/phenotypic-features/362f11d9-5071-4bde-9bd2-a81f54c82b95/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [0658a11f-70fb-4d39-9234-464658f0788c](/phenotypic-features/0658a11f-70fb-4d39-9234-464658f0788c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [51003264-5fb0-442f-9309-d022709f2370](/phenotypic-features/51003264-5fb0-442f-9309-d022709f2370/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [72188cbf-1712-43d0-b0e0-1cc8c4d7b8c7](/phenotypic-features/72188cbf-1712-43d0-b0e0-1cc8c4d7b8c7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3500WGWY](/human-donors/IGVFDO3500WGWY/) has in progress subobject phenotypic feature [fab5e871-48a1-4b36-a19c-b1db770b29bc](/phenotypic-features/fab5e871-48a1-4b36-a19c-b1db770b29bc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3500WGWY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3500WGWY](/human-donors/IGVFDO3500WGWY/) has in progress subobject phenotypic feature [f0051b34-124d-4a7e-923a-0744c22167fc](/phenotypic-features/f0051b34-124d-4a7e-923a-0744c22167fc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3500WGWY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3500WGWY](/human-donors/IGVFDO3500WGWY/) has in progress subobject phenotypic feature [043ae635-9a60-4cc7-a6c8-16645a562cfe](/phenotypic-features/043ae635-9a60-4cc7-a6c8-16645a562cfe/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3500WGWY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3500WGWY](/human-donors/IGVFDO3500WGWY/) has in progress subobject phenotypic feature [35e99959-8112-4f03-bb25-0ca75a12586e](/phenotypic-features/35e99959-8112-4f03-bb25-0ca75a12586e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3500WGWY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2207KFPL](/human-donors/IGVFDO2207KFPL/) has in progress subobject phenotypic feature [00112659-1a18-4582-b793-18e4c99be394](/phenotypic-features/00112659-1a18-4582-b793-18e4c99be394/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2207KFPL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2207KFPL](/human-donors/IGVFDO2207KFPL/) has in progress subobject phenotypic feature [25126354-ca02-4ec1-a06e-36b0db2021bc](/phenotypic-features/25126354-ca02-4ec1-a06e-36b0db2021bc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2207KFPL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2207KFPL](/human-donors/IGVFDO2207KFPL/) has in progress subobject phenotypic feature [ad40ee00-f060-451c-abbf-813c660d92ca](/phenotypic-features/ad40ee00-f060-451c-abbf-813c660d92ca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2207KFPL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2207KFPL](/human-donors/IGVFDO2207KFPL/) has in progress subobject phenotypic feature [f94ea7b2-cd2e-48e0-852d-bc22ab3a9753](/phenotypic-features/f94ea7b2-cd2e-48e0-852d-bc22ab3a9753/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2207KFPL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2207KFPL](/human-donors/IGVFDO2207KFPL/) has in progress subobject phenotypic feature [c14cc96a-accc-4eb0-b1cf-501d7392c9b1](/phenotypic-features/c14cc96a-accc-4eb0-b1cf-501d7392c9b1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2207KFPL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8d33ce55-7875-4008-8ea0-117b359f3bde](/phenotypic-features/8d33ce55-7875-4008-8ea0-117b359f3bde/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [5aff39eb-64aa-4ab2-b6ac-9352e4e5974d](/phenotypic-features/5aff39eb-64aa-4ab2-b6ac-9352e4e5974d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8a8a3203-c182-4206-8786-d22c604017ca](/phenotypic-features/8a8a3203-c182-4206-8786-d22c604017ca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [a331f60c-ad57-4e67-abef-71ce7f5c533b](/phenotypic-features/a331f60c-ad57-4e67-abef-71ce7f5c533b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [e5d45886-2d5a-4f54-9595-ddecf9ee0dc3](/phenotypic-features/e5d45886-2d5a-4f54-9595-ddecf9ee0dc3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [b4968851-2538-49ab-a27e-be55b86b05b9](/phenotypic-features/b4968851-2538-49ab-a27e-be55b86b05b9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [842c58cd-8b71-4cd6-a121-989c48f6a757](/phenotypic-features/842c58cd-8b71-4cd6-a121-989c48f6a757/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [580639c7-8b7a-4e04-a362-38b90bb8ccef](/phenotypic-features/580639c7-8b7a-4e04-a362-38b90bb8ccef/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [b59c47e4-8549-4b63-95c7-c7b732cd80a1](/phenotypic-features/b59c47e4-8549-4b63-95c7-c7b732cd80a1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [4f68640b-3f92-4906-9bac-808001031fbb](/phenotypic-features/4f68640b-3f92-4906-9bac-808001031fbb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [58a6b3f4-d283-4561-a436-8c6d81773bea](/phenotypic-features/58a6b3f4-d283-4561-a436-8c6d81773bea/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [2d016559-41a5-4d0d-a206-e9b31fadb322](/phenotypic-features/2d016559-41a5-4d0d-a206-e9b31fadb322/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [5c7de610-9d77-4450-b755-6296339a9a06](/phenotypic-features/5c7de610-9d77-4450-b755-6296339a9a06/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [379eea64-a47e-4b72-9c55-562a0998a7be](/phenotypic-features/379eea64-a47e-4b72-9c55-562a0998a7be/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [73d02d35-b7a0-4250-9e20-8fe585c949ff](/phenotypic-features/73d02d35-b7a0-4250-9e20-8fe585c949ff/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [58ee8a7b-2d6c-4319-a3ed-659f8f4bd2ad](/phenotypic-features/58ee8a7b-2d6c-4319-a3ed-659f8f4bd2ad/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [c7893559-54d2-4768-bfcc-e705d88c884d](/phenotypic-features/c7893559-54d2-4768-bfcc-e705d88c884d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [213d8bcb-11ce-4b7f-ae80-8a3e9b73ae83](/phenotypic-features/213d8bcb-11ce-4b7f-ae80-8a3e9b73ae83/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [5c5d17b8-c589-44ff-8c25-ac4b8b32e0fc](/phenotypic-features/5c5d17b8-c589-44ff-8c25-ac4b8b32e0fc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [b26dcc82-a5c2-42f3-a63e-a43fd9359ebf](/phenotypic-features/b26dcc82-a5c2-42f3-a63e-a43fd9359ebf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [27767bd2-d2f7-4c12-a080-0891f07591b7](/phenotypic-features/27767bd2-d2f7-4c12-a080-0891f07591b7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2801HZMZ](/human-donors/IGVFDO2801HZMZ/) has in progress subobject phenotypic feature [b3367270-478c-48c1-bd02-983a0a3b068d](/phenotypic-features/b3367270-478c-48c1-bd02-983a0a3b068d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2801HZMZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2801HZMZ](/human-donors/IGVFDO2801HZMZ/) has in progress subobject phenotypic feature [de550bd8-340a-43ab-b069-231b217394e9](/phenotypic-features/de550bd8-340a-43ab-b069-231b217394e9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2801HZMZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2801HZMZ](/human-donors/IGVFDO2801HZMZ/) has in progress subobject phenotypic feature [3228a560-72b8-4229-a8ea-38bf217cb10b](/phenotypic-features/3228a560-72b8-4229-a8ea-38bf217cb10b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2801HZMZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2801HZMZ](/human-donors/IGVFDO2801HZMZ/) has in progress subobject phenotypic feature [d9c66628-fe43-4477-b26f-1c7c93881877](/phenotypic-features/d9c66628-fe43-4477-b26f-1c7c93881877/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2801HZMZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8584FBOT](/human-donors/IGVFDO8584FBOT/) has in progress subobject phenotypic feature [081bee5b-d6e8-4ef1-81cf-9b3d251602f3](/phenotypic-features/081bee5b-d6e8-4ef1-81cf-9b3d251602f3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8584FBOT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8584FBOT](/human-donors/IGVFDO8584FBOT/) has in progress subobject phenotypic feature [b15b14de-7a08-4678-af44-1c5811e19bf3](/phenotypic-features/b15b14de-7a08-4678-af44-1c5811e19bf3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8584FBOT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8584FBOT](/human-donors/IGVFDO8584FBOT/) has in progress subobject phenotypic feature [e3d1ac8a-eeaa-4332-9dc9-bba7e61cdd99](/phenotypic-features/e3d1ac8a-eeaa-4332-9dc9-bba7e61cdd99/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8584FBOT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8584FBOT](/human-donors/IGVFDO8584FBOT/) has in progress subobject phenotypic feature [78c7f600-8577-4123-ae02-de8701e442e7](/phenotypic-features/78c7f600-8577-4123-ae02-de8701e442e7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8584FBOT/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS3632OOWJ](/measurement-sets/IGVFDS3632OOWJ/) has sequence file(s): [IGVFFI6289JENK](/sequence-files/IGVFFI6289JENK/), [IGVFFI8456WOIL](/sequence-files/IGVFFI8456WOIL/), [IGVFFI4651DNCU](/sequence-files/IGVFFI4651DNCU/), [IGVFFI9989WEOC](/sequence-files/IGVFFI9989WEOC/), [IGVFFI1603SDAQ](/sequence-files/IGVFFI1603SDAQ/), [IGVFFI6974PKCH](/sequence-files/IGVFFI6974PKCH/), [IGVFFI3326SNLT](/sequence-files/IGVFFI3326SNLT/), [IGVFFI8162GMYL](/sequence-files/IGVFFI8162GMYL/), [IGVFFI7967ASJR](/sequence-files/IGVFFI7967ASJR/), [IGVFFI1924KDPU](/sequence-files/IGVFFI1924KDPU/), [IGVFFI9427ZNMT](/sequence-files/IGVFFI9427ZNMT/), [IGVFFI8561YYHE](/sequence-files/IGVFFI8561YYHE/), [IGVFFI5964HARW](/sequence-files/IGVFFI5964HARW/), [IGVFFI6302AZZA](/sequence-files/IGVFFI6302AZZA/), [IGVFFI4075LHUI](/sequence-files/IGVFFI4075LHUI/), [IGVFFI9657QNIW](/sequence-files/IGVFFI9657QNIW/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS3632OOWJ/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS3632OOWJ](/measurement-sets/IGVFDS3632OOWJ/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS3632OOWJ/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS3632OOWJ](/measurement-sets/IGVFDS3632OOWJ/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS3632OOWJ/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T21:43:30.568679+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO5214IKNF/",
"accession": "IGVFDO5214IKNF",
"aliases": [
"igvf:corces_donor_BANN1070"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8584FBOT/",
"accession": "IGVFDO8584FBOT",
"aliases": [
"igvf:corces_donor_BANN0315"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2801HZMZ/",
"accession": "IGVFDO2801HZMZ",
"aliases": [
"igvf:corces_donor_BANN1028"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0565OSFT/",
"accession": "IGVFDO0565OSFT",
"aliases": [
"igvf:corces_donor_BANN1805"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2207KFPL/",
"accession": "IGVFDO2207KFPL",
"aliases": [
"igvf:corces_donor_BANN0413"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6000JDZW/",
"accession": "IGVFDO6000JDZW",
"aliases": [
"igvf:corces_donor_BANN1858"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5912PIZP/",
"accession": "IGVFDO5912PIZP",
"aliases": [
"igvf:corces_donor_BANN1830"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1052TZWO/",
"accession": "IGVFDO1052TZWO",
"aliases": [
"igvf:corces_donor_BANN1851"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8504RBEL/",
"accession": "IGVFDO8504RBEL",
"aliases": [
"igvf:corces_donor_BANN1546"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7678VYKP/",
"accession": "IGVFDO7678VYKP",
"aliases": [
"igvf:corces_donor_BANN1235"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7109IWDJ/",
"accession": "IGVFDO7109IWDJ",
"aliases": [
"igvf:corces_donor_BANN2005"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3500WGWY/",
"accession": "IGVFDO3500WGWY",
"aliases": [
"igvf:corces_donor_BANN1083"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI6289JENK/",
"accession": "IGVFFI6289JENK",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L004_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:59.428115+00:00",
"file_format": "fastq",
"file_size": 2167454568,
"href": "/sequence-files/IGVFFI6289JENK/@@download/IGVFFI6289JENK.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/19260add-41d1-47b2-a1ad-2dcc6bcf51e0/IGVFFI6289JENK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L004_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8456WOIL/",
"accession": "IGVFFI8456WOIL",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L003_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:40.686498+00:00",
"file_format": "fastq",
"file_size": 325734019,
"href": "/sequence-files/IGVFFI8456WOIL/@@download/IGVFFI8456WOIL.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/0fee538e-b2f8-4f19-a2e5-14dace2b101c/IGVFFI8456WOIL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L003_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4651DNCU/",
"accession": "IGVFFI4651DNCU",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L001_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:15.226326+00:00",
"file_format": "fastq",
"file_size": 2096218971,
"href": "/sequence-files/IGVFFI4651DNCU/@@download/IGVFFI4651DNCU.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/d72b1d17-9e9f-496c-882e-825bd5ec3c61/IGVFFI4651DNCU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L001_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9989WEOC/",
"accession": "IGVFFI9989WEOC",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L003_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:36.285449+00:00",
"file_format": "fastq",
"file_size": 349952108,
"href": "/sequence-files/IGVFFI9989WEOC/@@download/IGVFFI9989WEOC.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/0550433a-b539-47b9-9bba-9b0f7675ff2d/IGVFFI9989WEOC.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L003_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1603SDAQ/",
"accession": "IGVFFI1603SDAQ",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L002_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:18.216640+00:00",
"file_format": "fastq",
"file_size": 353460685,
"href": "/sequence-files/IGVFFI1603SDAQ/@@download/IGVFFI1603SDAQ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/eece0b4b-3815-456f-ab4d-8033de29e302/IGVFFI1603SDAQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L002_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6974PKCH/",
"accession": "IGVFFI6974PKCH",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L001_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:05.214049+00:00",
"file_format": "fastq",
"file_size": 340903032,
"href": "/sequence-files/IGVFFI6974PKCH/@@download/IGVFFI6974PKCH.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/68bf9afb-3602-4c3d-9fdf-9629869bb7bf/IGVFFI6974PKCH.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L001_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3326SNLT/",
"accession": "IGVFFI3326SNLT",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L002_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:24.065205+00:00",
"file_format": "fastq",
"file_size": 328543277,
"href": "/sequence-files/IGVFFI3326SNLT/@@download/IGVFFI3326SNLT.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/23e8578e-beda-4e28-b0e7-0fa47997eded/IGVFFI3326SNLT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L002_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8162GMYL/",
"accession": "IGVFFI8162GMYL",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L001_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:08.389224+00:00",
"file_format": "fastq",
"file_size": 317274372,
"href": "/sequence-files/IGVFFI8162GMYL/@@download/IGVFFI8162GMYL.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/41b8f744-d2b0-462c-8a8a-eace57b5a21a/IGVFFI8162GMYL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L001_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7967ASJR/",
"accession": "IGVFFI7967ASJR",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L001_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:11.887870+00:00",
"file_format": "fastq",
"file_size": 971770769,
"href": "/sequence-files/IGVFFI7967ASJR/@@download/IGVFFI7967ASJR.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/beabd52a-bb5a-4f29-bb51-606bfeed3384/IGVFFI7967ASJR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L001_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1924KDPU/",
"accession": "IGVFFI1924KDPU",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L002_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:27.908963+00:00",
"file_format": "fastq",
"file_size": 1000049038,
"href": "/sequence-files/IGVFFI1924KDPU/@@download/IGVFFI1924KDPU.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b7744ea3-f908-4ed3-947c-0a7123383b1b/IGVFFI1924KDPU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L002_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9427ZNMT/",
"accession": "IGVFFI9427ZNMT",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L002_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:32.275221+00:00",
"file_format": "fastq",
"file_size": 2158263997,
"href": "/sequence-files/IGVFFI9427ZNMT/@@download/IGVFFI9427ZNMT.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/ff97f931-dfc3-4fb6-9138-a96a2e9d9151/IGVFFI9427ZNMT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L002_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8561YYHE/",
"accession": "IGVFFI8561YYHE",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L003_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:44.200461+00:00",
"file_format": "fastq",
"file_size": 996056671,
"href": "/sequence-files/IGVFFI8561YYHE/@@download/IGVFFI8561YYHE.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/da5f5219-c4b6-47b0-b33e-91551358543e/IGVFFI8561YYHE.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L003_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5964HARW/",
"accession": "IGVFFI5964HARW",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L003_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:47.105257+00:00",
"file_format": "fastq",
"file_size": 2142520907,
"href": "/sequence-files/IGVFFI5964HARW/@@download/IGVFFI5964HARW.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/37dfd761-9ed5-4c92-b735-8dc5b1f2f326/IGVFFI5964HARW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L003_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6302AZZA/",
"accession": "IGVFFI6302AZZA",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L004_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:49.775268+00:00",
"file_format": "fastq",
"file_size": 353255842,
"href": "/sequence-files/IGVFFI6302AZZA/@@download/IGVFFI6302AZZA.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/f30bda39-6d39-4c12-b870-cbbb09569573/IGVFFI6302AZZA.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L004_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4075LHUI/",
"accession": "IGVFFI4075LHUI",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L004_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:52.506433+00:00",
"file_format": "fastq",
"file_size": 327514097,
"href": "/sequence-files/IGVFFI4075LHUI/@@download/IGVFFI4075LHUI.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/c83ddf22-bc1c-4897-ac85-8a4e0d3de3e0/IGVFFI4075LHUI.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L004_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9657QNIW/",
"accession": "IGVFFI9657QNIW",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP017_G1_P064_L004_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T21:33:55.875242+00:00",
"file_format": "fastq",
"file_size": 1011170106,
"href": "/sequence-files/IGVFFI9657QNIW/@@download/IGVFFI9657QNIW.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/91d3922b-a718-438e-9649-0f3836b1f60b/IGVFFI9657QNIW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP017_G1_L001_P064_S5_L004_R1_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI8751YQRY/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS6703RFLO/",
"accession": "IGVFDS6703RFLO",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM0214EVMC/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM0214EVMC",
"aliases": [
"igvf:corces_multiplexedSample_RP017_G1"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 87 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 85 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T21:33:05.214049+00:00",
"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "eba2a82d-ae9a-4b97-97c8-a228280a545b"
}