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IGVFDS3629MIXK

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 207)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 599
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
I1
8709
Barcode index
22LMVNLT4
631 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8901
Read 1
22LMVNLT4
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
3912
Read 1
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8613
Barcode index
22LMVNLT4
622 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3876
Read 2
22523KLT3
515 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4350
Read 1
H75F7DSX5
3.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9189
Barcode index
22LMVNLT4
593 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
3876
Read 1
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8613
Read 2
22LMVNLT4
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9093
Read 2
22LMVNLT4
1.0 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 207)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 242
Jason Buenrostro, Broad