IGVFDS3548TJJM

released

GRU

File Set Type

experimental data

Summary

single-cell ATAC-seq (SHARE-seq)

Assay Term

single-cell ATAC-seq

Sample Summaries

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 206)

Protocols

https://www.protocols.io/view/share-seq-protocol-v2-2-di3y4gpw

Aliases

buenrostro-bernstein:scATAC Lib 592

Attribution

Jason Buenrostro, Broad

(

HG011986 — Jason Buenrostro

)

Sequencing Results (Illumina)

33 items

Read Names

IGVFFI0489RBMU

fastq

reads

9182

Barcode index

IGVFFI3949HJSH

Illumina NovaSeq X

22LMVNLT4

366 MB

Jason Buenrostro, Broad

validated

IGVFFI0953SLXG

fastq

reads

4098

IGVFFI8136OTGX

Illumina NovaSeq X

22523KLT3

543 MB

Jason Buenrostro, Broad

validated

IGVFFI1129XLXW

fastq

reads

8702

IGVFFI0805WOGG

Illumina NovaSeq X

22LMVNLT4

641 MB

Jason Buenrostro, Broad

validated

IGVFFI1356JMCX

fastq

reads

8606

IGVFFI6041IYQH

Illumina NovaSeq X

22LMVNLT4

656 MB

Jason Buenrostro, Broad

validated

IGVFFI1857LXJV

fastq

reads

9182

IGVFFI3949HJSH

Illumina NovaSeq X

22LMVNLT4

618 MB

Jason Buenrostro, Broad

validated

IGVFFI2085IZPY

fastq

reads

8894

Barcode index

IGVFFI5513VLMI

Illumina NovaSeq X

22LMVNLT4

387 MB

Jason Buenrostro, Broad

validated

IGVFFI2421XAFJ

fastq

reads

8510

IGVFFI4800ENWN

Illumina NovaSeq X

22LMVNLT4

685 MB

Jason Buenrostro, Broad

validated

IGVFFI2486MIKX

fastq

reads

8510

IGVFFI4800ENWN

Illumina NovaSeq X

22LMVNLT4

658 MB

Jason Buenrostro, Broad

validated

IGVFFI2677UNCP

fastq

reads

9086

IGVFFI2963YDGD

Illumina NovaSeq X

22LMVNLT4

622 MB

Jason Buenrostro, Broad

validated

IGVFFI3182DFLT

fastq

reads

4098

Barcode index

IGVFFI8136OTGX

Illumina NovaSeq X

22523KLT3

475 MB

Jason Buenrostro, Broad

validated

Samples

1 item

Accession

Type

Sample Terms

Associated Construct Library Sets

Summary

IGVFSM6043MNJX

InVitroSystem

induced pluripotent stem cell

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 206)