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IGVFDS3386JJOY

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 205)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 585
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

21 items
Read Names
fastq
reads
R1
1041
Read 1
22773CLT3
564 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
957
Read 2
22773CLT3
242 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4016
Read 1
22523KLT3
582 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4088
Barcode index
22523KLT3
271 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1083
Read 1
22773CLT3
562 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4088
Read 2
22523KLT3
264 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
957
Read 1
22773CLT3
559 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1083
Read 2
22773CLT3
247 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1041
Barcode index
22773CLT3
266 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4088
Read 1
22523KLT3
593 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 205)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 454
Jason Buenrostro, Broad