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IGVFDS3368OEWN

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 1266
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

10 items
Read Names
fastq
reads
R2
7332
Read 2, Barcode index
22KFF5LT3
13 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
5369
Read 1
22KHF5LT3
7.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
5359
Read 1
22KHF5LT3
7.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
5369
Read 2, Barcode index
22KHF5LT3
11 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
5364
Read 2, Barcode index
22KHF5LT3
11 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
7337
Read 1
22KFF5LT3
8.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
7337
Read 2, Barcode index
22KFF5LT3
13 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
5359
Read 2, Barcode index
22KHF5LT3
11 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
5364
Read 1
22KHF5LT3
7.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
7332
Read 1
22KFF5LT3
8.6 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 432)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • buenrostro-bernstein:Donor 2047
unspecified
Mus musculus

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
single-cell ATAC-seq (SHARE-seq), single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:AnalysisSet_BioSam-4965_SS-PKR-432
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 607
Jason Buenrostro, Broad