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IGVFDS3355ZETN

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 183)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 464
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
R2
9158
Read 2
22LMVNLT4
750 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9158
Read 1
22LMVNLT4
789 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8678
Read 1
22LMVNLT4
838 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1030
Barcode index
22773CLT3
483 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9158
Barcode index
22LMVNLT4
462 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
946
Read 2
22773CLT3
543 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8582
Barcode index
22LMVNLT4
484 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8966
Read 2
22LMVNLT4
761 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8870
Read 2
22LMVNLT4
800 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9062
Read 1
22LMVNLT4
830 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 183)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 443
Jason Buenrostro, Broad