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"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [68fe3a71-6fc0-47e8-834c-794714585a7e](/phenotypic-features/68fe3a71-6fc0-47e8-834c-794714585a7e/).",
"level": 30,
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"name": "audit_item_status",
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},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [b2b44f93-e621-43f7-80a5-3d1b73a794b2](/phenotypic-features/b2b44f93-e621-43f7-80a5-3d1b73a794b2/).",
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"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [8442786a-d708-482c-8764-201d14e47680](/phenotypic-features/8442786a-d708-482c-8764-201d14e47680/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [e60abb08-e197-449b-8eb8-7172db9d3bac](/phenotypic-features/e60abb08-e197-449b-8eb8-7172db9d3bac/).",
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"name": "audit_item_status",
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},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [08a4bc6e-1d5d-46df-92f0-6085a35a75a7](/phenotypic-features/08a4bc6e-1d5d-46df-92f0-6085a35a75a7/).",
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"path": "/human-donors/IGVFDO6513APBX/"
}
],
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{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS3348OOKN](/measurement-sets/IGVFDS3348OOKN/) has sequence file(s): [IGVFFI0363NEBS](/sequence-files/IGVFFI0363NEBS/), [IGVFFI8444FPWR](/sequence-files/IGVFFI8444FPWR/), [IGVFFI6494KIFP](/sequence-files/IGVFFI6494KIFP/), [IGVFFI9268KKIZ](/sequence-files/IGVFFI9268KKIZ/), [IGVFFI1344NGAU](/sequence-files/IGVFFI1344NGAU/), [IGVFFI1670GGKU](/sequence-files/IGVFFI1670GGKU/), [IGVFFI7008FYFA](/sequence-files/IGVFFI7008FYFA/), [IGVFFI7455ASWB](/sequence-files/IGVFFI7455ASWB/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
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"path": "/measurement-sets/IGVFDS3348OOKN/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS3348OOKN](/measurement-sets/IGVFDS3348OOKN/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
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}
],
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{
"category": "missing analysis",
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}
]
},
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},
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],
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}
],
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],
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{
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},
{
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},
{
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],
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},
{
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"Item"
],
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"summary": "substantia nigra",
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},
{
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"Item"
],
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},
{
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"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
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}
],
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"summary": "multiplexed sample: Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 70 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease; ... and 8 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
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"submitted_by": {
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},
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"summary": "single-nucleus ATAC-seq (10x multiome)",
"uuid": "41b6416e-061e-4503-a3a0-fc5cc991142d"
}