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IGVFDS3343IRTP

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 171)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 394
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

45 items
Read Names
fastq
reads
R1
924
Read 1
22773CLT3
199 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8824
Barcode index
22LMVNLT4
1.3 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9016
Read 2
22LMVNLT4
2.0 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8920
Barcode index
22LMVNLT4
1.2 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
966
Read 1
22773CLT3
199 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
924
Read 2
22773CLT3
96 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8728
Read 2
22LMVNLT4
2.0 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9112
Barcode index
22LMVNLT4
1.2 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1008
Read 2
22773CLT3
97 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8728
Read 1
22LMVNLT4
2.1 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 171)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 421
Jason Buenrostro, Broad