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INDEXED
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MeasurementSet
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IGVFDS3330GATY
IGVFDS3330GATY
released
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Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens (42 years) fibroblast cell
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C29_day0
Submitter Comment
This file set previously linked to the Sample /in-vitro-systems/IGVFSM8575NPOB/.
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0418MRCV
fastq
reads
R1
1
Illumina NovaSeq X
8
2.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI1239ZEWJ
fastq
reads
R2
2
Illumina NovaSeq X
2
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI1444QOFX
fastq
reads
R2
2
Illumina NovaSeq X
8
2.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI1591YHHT
fastq
reads
R1
1
Illumina NovaSeq X
2
2.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI1884KFQZ
fastq
reads
R1
1
Illumina NovaSeq X
7
2.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI4239PHTY
fastq
reads
R1
1
Illumina NovaSeq X
6
2.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI4864NQZH
fastq
reads
R1
1
Illumina NovaSeq X
4
2.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI4891UDQF
fastq
reads
R1
1
Illumina NovaSeq X
1
2.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI6550PBVX
fastq
reads
R2
2
Illumina NovaSeq X
5
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI7000NPFQ
fastq
reads
R2
2
Illumina NovaSeq X
3
2.4 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM3093UPGP
PrimaryCell
fibroblast
Homo sapiens (42 years) fibroblast cell
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO3754NCBP
chongyuan-luo:C29
unspecified
Homo sapiens