Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Resources
Data Model
About
Help
Sign In
INDEXED
Home
/
MeasurementSet
/
IGVFDS3304YLTM
IGVFDS3304YLTM
released
Json view
File Set Type
experimental data
Summary
snMCT-seq
Assay Term
single-nucleus methylcytosine and transcriptome sequencing assay
Sample Summaries
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 3 days, Homo sapiens
Protocols
https://www.protocols.io/view/snmcat-v2-x54v9jby1g3e/v2
Aliases
chongyuan-luo:pgp_snmct_C37_day3
Sequencing Results (Illumina)
8 items
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI1112KALF
fastq
reads
R2
2
Read 2
Illumina NovaSeq X
2
6.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI1133IILN
fastq
reads
R1
1
Illumina NovaSeq X
3
7.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI1609CTOK
fastq
reads
R2
2
Read 2
Illumina NovaSeq X
1
6.9 GB
Chongyuan Luo, UCLA
validated
IGVFFI1940NBZG
fastq
reads
R1
1
Illumina NovaSeq X
2
6.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI2683KEBM
fastq
reads
R1
1
Read 1
Illumina NovaSeq X
4
7.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI4852XGGI
fastq
reads
R2
2
Illumina NovaSeq X
4
6.9 GB
Chongyuan Luo, UCLA
validated
IGVFFI7885SQWQ
fastq
reads
R1
1
Illumina NovaSeq X
1
6.9 GB
Chongyuan Luo, UCLA
validated
IGVFFI8735COZY
fastq
reads
R2
2
Illumina NovaSeq X
3
6.9 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM2615PEIB
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 3 days, Homo sapiens
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO0351NYZH
chongyuan-luo:C37
unspecified
Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA