{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS3205MIGH/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS3205MIGH",
"aliases": [
"igvf:corces_measurementSet_RP002_G1_ATAC"
],
"assay_term": {
"@id": "/assay-terms/OBI_0002762/",
"assay_slims": [
"chromatin accessibility"
],
"status": "released",
"term_name": "single-nucleus ATAC-seq"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [16dd0641-17b5-4e28-8df8-c1557d69956e](/phenotypic-features/16dd0641-17b5-4e28-8df8-c1557d69956e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [f2944cd8-3e11-46e3-8dd8-a60165632a59](/phenotypic-features/f2944cd8-3e11-46e3-8dd8-a60165632a59/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [0130d925-ca8e-441c-a725-9525a350da63](/phenotypic-features/0130d925-ca8e-441c-a725-9525a350da63/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [3ea18406-059b-4181-ad35-c617adcf8f07](/phenotypic-features/3ea18406-059b-4181-ad35-c617adcf8f07/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4108VCBA](/human-donors/IGVFDO4108VCBA/) has in progress subobject phenotypic feature [aff60c46-5191-4203-ac06-8623d7e676fa](/phenotypic-features/aff60c46-5191-4203-ac06-8623d7e676fa/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4108VCBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4108VCBA](/human-donors/IGVFDO4108VCBA/) has in progress subobject phenotypic feature [956b5474-2acd-4c13-bbc1-dd81dba0622a](/phenotypic-features/956b5474-2acd-4c13-bbc1-dd81dba0622a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4108VCBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4108VCBA](/human-donors/IGVFDO4108VCBA/) has in progress subobject phenotypic feature [f32d310f-3150-421e-9656-a5fbaf04eebd](/phenotypic-features/f32d310f-3150-421e-9656-a5fbaf04eebd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4108VCBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4108VCBA](/human-donors/IGVFDO4108VCBA/) has in progress subobject phenotypic feature [d2909f2d-5e28-4e1f-859d-c562f1c883af](/phenotypic-features/d2909f2d-5e28-4e1f-859d-c562f1c883af/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4108VCBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4108VCBA](/human-donors/IGVFDO4108VCBA/) has in progress subobject phenotypic feature [7a3d9384-554b-480b-b1f3-41a99dd54465](/phenotypic-features/7a3d9384-554b-480b-b1f3-41a99dd54465/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4108VCBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4108VCBA](/human-donors/IGVFDO4108VCBA/) has in progress subobject phenotypic feature [1bb96444-071d-4a8d-81ef-b6567ef83275](/phenotypic-features/1bb96444-071d-4a8d-81ef-b6567ef83275/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4108VCBA/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [49ab6d82-1b46-419b-8cc4-45d027be56fe](/phenotypic-features/49ab6d82-1b46-419b-8cc4-45d027be56fe/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [5aadb7a0-3ba4-46ce-a63b-737069e87fe2](/phenotypic-features/5aadb7a0-3ba4-46ce-a63b-737069e87fe2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [367239fb-e961-4d34-bf97-186fe47419cd](/phenotypic-features/367239fb-e961-4d34-bf97-186fe47419cd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [11fbe4b3-7cc6-46a9-a210-6deab3bc4d79](/phenotypic-features/11fbe4b3-7cc6-46a9-a210-6deab3bc4d79/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [73b99e9c-b591-472b-ae45-76b617c7200c](/phenotypic-features/73b99e9c-b591-472b-ae45-76b617c7200c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [f98a6805-7706-4960-afd9-0c28fdbd4b6a](/phenotypic-features/f98a6805-7706-4960-afd9-0c28fdbd4b6a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [bc1a71d4-776d-49f9-8119-1bb7ebc736b5](/phenotypic-features/bc1a71d4-776d-49f9-8119-1bb7ebc736b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [992572c7-9a8c-4b52-8e07-cf9c9b7c9ecd](/phenotypic-features/992572c7-9a8c-4b52-8e07-cf9c9b7c9ecd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [486706cb-1a67-4693-9a5a-20c604cc2976](/phenotypic-features/486706cb-1a67-4693-9a5a-20c604cc2976/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [21180334-b9e1-4c74-93e8-88a02b7e21a4](/phenotypic-features/21180334-b9e1-4c74-93e8-88a02b7e21a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [cc110bac-e1d1-42b9-a9a0-d50c2dee4d59](/phenotypic-features/cc110bac-e1d1-42b9-a9a0-d50c2dee4d59/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [84af69f8-2342-470e-a2e8-49c3d9ad9e49](/phenotypic-features/84af69f8-2342-470e-a2e8-49c3d9ad9e49/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7649CIGW](/human-donors/IGVFDO7649CIGW/) has in progress subobject phenotypic feature [4f1b99fe-e36c-4115-8ced-674dbbf1ac9c](/phenotypic-features/4f1b99fe-e36c-4115-8ced-674dbbf1ac9c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7649CIGW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7649CIGW](/human-donors/IGVFDO7649CIGW/) has in progress subobject phenotypic feature [736018a1-4e13-4bc1-8864-74b5e54a2358](/phenotypic-features/736018a1-4e13-4bc1-8864-74b5e54a2358/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7649CIGW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7649CIGW](/human-donors/IGVFDO7649CIGW/) has in progress subobject phenotypic feature [a61887d1-8a69-4b01-a7be-faf30a0e4335](/phenotypic-features/a61887d1-8a69-4b01-a7be-faf30a0e4335/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7649CIGW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7649CIGW](/human-donors/IGVFDO7649CIGW/) has in progress subobject phenotypic feature [5894cb18-8b1e-4c83-bb6f-26583790b80e](/phenotypic-features/5894cb18-8b1e-4c83-bb6f-26583790b80e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7649CIGW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [0fd0acf9-94ba-4952-9984-7d1e562d121a](/phenotypic-features/0fd0acf9-94ba-4952-9984-7d1e562d121a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [9987347f-6f4d-4d82-88c9-0c4c4317a278](/phenotypic-features/9987347f-6f4d-4d82-88c9-0c4c4317a278/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [be5d84fc-8dc2-496a-8ecf-440a2092a07c](/phenotypic-features/be5d84fc-8dc2-496a-8ecf-440a2092a07c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [2215de1b-9e0d-47cd-a69d-7f4faf6b0976](/phenotypic-features/2215de1b-9e0d-47cd-a69d-7f4faf6b0976/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [67b114cf-7764-4391-8fd6-ac46ac9bc7a4](/phenotypic-features/67b114cf-7764-4391-8fd6-ac46ac9bc7a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [fb128197-8fc4-4ae2-90ee-244353c5c115](/phenotypic-features/fb128197-8fc4-4ae2-90ee-244353c5c115/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [5bbb08a5-85e9-4c47-b3a0-47e8c124020a](/phenotypic-features/5bbb08a5-85e9-4c47-b3a0-47e8c124020a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [3e9cf626-9ed1-49cb-a08d-99e7e9d01e03](/phenotypic-features/3e9cf626-9ed1-49cb-a08d-99e7e9d01e03/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [c1af321e-187f-465d-82c2-7f3167821d82](/phenotypic-features/c1af321e-187f-465d-82c2-7f3167821d82/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [d8974890-5de1-43a0-bbdd-662642652835](/phenotypic-features/d8974890-5de1-43a0-bbdd-662642652835/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [f47cb079-e39d-44ed-aa9b-ae76dd89e912](/phenotypic-features/f47cb079-e39d-44ed-aa9b-ae76dd89e912/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [f3293daa-5b2a-482d-b783-e74292e01215](/phenotypic-features/f3293daa-5b2a-482d-b783-e74292e01215/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [be888d35-90a2-4dc6-8192-63ff7c0a544d](/phenotypic-features/be888d35-90a2-4dc6-8192-63ff7c0a544d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [6bbe54ee-eaea-42f2-a7a1-c71e9aef58bc](/phenotypic-features/6bbe54ee-eaea-42f2-a7a1-c71e9aef58bc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [d8416687-8d5b-433e-a553-eb11125a2fa6](/phenotypic-features/d8416687-8d5b-433e-a553-eb11125a2fa6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [0026a1b8-bc9b-4ca3-8550-db33dea01cf2](/phenotypic-features/0026a1b8-bc9b-4ca3-8550-db33dea01cf2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [20739539-1577-4aa9-a16f-e48042d342a1](/phenotypic-features/20739539-1577-4aa9-a16f-e48042d342a1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [9a04e4d1-7a8c-4148-a9fa-9d0cc5b6b156](/phenotypic-features/9a04e4d1-7a8c-4148-a9fa-9d0cc5b6b156/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [cf42e423-497d-4ce1-b16c-de4b75c47c15](/phenotypic-features/cf42e423-497d-4ce1-b16c-de4b75c47c15/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [4ce05436-3aba-4ff2-adfe-7b35c9701431](/phenotypic-features/4ce05436-3aba-4ff2-adfe-7b35c9701431/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [fcb965cc-7b61-4d20-822d-bd5a898093b5](/phenotypic-features/fcb965cc-7b61-4d20-822d-bd5a898093b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [ea3dee25-4ac9-4957-a68d-c098ce615ca3](/phenotypic-features/ea3dee25-4ac9-4957-a68d-c098ce615ca3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [20ce9114-8f44-47dc-b1ff-6a44688bf47a](/phenotypic-features/20ce9114-8f44-47dc-b1ff-6a44688bf47a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [5893460c-131f-4b98-acd5-26997171dd9a](/phenotypic-features/5893460c-131f-4b98-acd5-26997171dd9a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [26dc3c60-2374-4916-ab7b-9f5bcb4ac64f](/phenotypic-features/26dc3c60-2374-4916-ab7b-9f5bcb4ac64f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [720bd45c-2c73-4875-a5b5-e72cc71bb6d0](/phenotypic-features/720bd45c-2c73-4875-a5b5-e72cc71bb6d0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [12a9cbe8-866d-423e-b734-d6d39b31fb34](/phenotypic-features/12a9cbe8-866d-423e-b734-d6d39b31fb34/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [ecd9afa5-b266-4da4-87d2-368b418027c9](/phenotypic-features/ecd9afa5-b266-4da4-87d2-368b418027c9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [87d488ba-ef89-494c-8024-bee2b8535732](/phenotypic-features/87d488ba-ef89-494c-8024-bee2b8535732/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [f57b6265-94b7-4979-be4c-73ef23b5faba](/phenotypic-features/f57b6265-94b7-4979-be4c-73ef23b5faba/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [0165d0f4-b610-4164-9bc3-08dc74af02b3](/phenotypic-features/0165d0f4-b610-4164-9bc3-08dc74af02b3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [3a8f2048-d423-49dc-872f-a2d52489895c](/phenotypic-features/3a8f2048-d423-49dc-872f-a2d52489895c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [5d86271f-e200-458e-b626-d45775c1f778](/phenotypic-features/5d86271f-e200-458e-b626-d45775c1f778/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [633cb08c-78bd-4268-b5d8-b893a02d26f8](/phenotypic-features/633cb08c-78bd-4268-b5d8-b893a02d26f8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [1e832ff1-71d0-41fc-9f36-fd4498dfee00](/phenotypic-features/1e832ff1-71d0-41fc-9f36-fd4498dfee00/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [a307f67e-a27c-4f71-933b-8391d36a0ffc](/phenotypic-features/a307f67e-a27c-4f71-933b-8391d36a0ffc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [9c586031-f537-409b-8205-585a19621b3f](/phenotypic-features/9c586031-f537-409b-8205-585a19621b3f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [687e8b69-25f0-4bb5-969e-635dd2d3f4a5](/phenotypic-features/687e8b69-25f0-4bb5-969e-635dd2d3f4a5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [f6830b8c-bd31-4ecc-868b-9167f991411f](/phenotypic-features/f6830b8c-bd31-4ecc-868b-9167f991411f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [c720825e-ee74-4c36-8a5e-9c70924435be](/phenotypic-features/c720825e-ee74-4c36-8a5e-9c70924435be/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS3205MIGH](/measurement-sets/IGVFDS3205MIGH/) has sequence file(s): [IGVFFI5062MMWW](/sequence-files/IGVFFI5062MMWW/), [IGVFFI0992RRCW](/sequence-files/IGVFFI0992RRCW/), [IGVFFI8004MIZU](/sequence-files/IGVFFI8004MIZU/), [IGVFFI6049LIRQ](/sequence-files/IGVFFI6049LIRQ/), [IGVFFI9237ULHA](/sequence-files/IGVFFI9237ULHA/), [IGVFFI1553CYJW](/sequence-files/IGVFFI1553CYJW/), [IGVFFI1259GFGP](/sequence-files/IGVFFI1259GFGP/), [IGVFFI3541INTD](/sequence-files/IGVFFI3541INTD/), [IGVFFI2518GHBO](/sequence-files/IGVFFI2518GHBO/), [IGVFFI5643YLTE](/sequence-files/IGVFFI5643YLTE/), [IGVFFI3978MJOW](/sequence-files/IGVFFI3978MJOW/), [IGVFFI2275CXDS](/sequence-files/IGVFFI2275CXDS/), [IGVFFI6495NLJS](/sequence-files/IGVFFI6495NLJS/), [IGVFFI3884TQHO](/sequence-files/IGVFFI3884TQHO/), [IGVFFI1199NQDL](/sequence-files/IGVFFI1199NQDL/), [IGVFFI7980VOSL](/sequence-files/IGVFFI7980VOSL/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS3205MIGH/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS3205MIGH](/measurement-sets/IGVFDS3205MIGH/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS3205MIGH/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS3205MIGH](/measurement-sets/IGVFDS3205MIGH/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS3205MIGH/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T19:50:36.511167+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO4191KJBR/",
"accession": "IGVFDO4191KJBR",
"aliases": [
"igvf:corces_donor_BANN0129"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8451NMBP/",
"accession": "IGVFDO8451NMBP",
"aliases": [
"igvf:corces_donor_BANN1756"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1997RFPJ/",
"accession": "IGVFDO1997RFPJ",
"aliases": [
"igvf:corces_donor_BANN1340"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4108VCBA/",
"accession": "IGVFDO4108VCBA",
"aliases": [
"igvf:corces_donor_BANN0325"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5205IAEO/",
"accession": "IGVFDO5205IAEO",
"aliases": [
"igvf:corces_donor_BANN1632"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0802OVOD/",
"accession": "IGVFDO0802OVOD",
"aliases": [
"igvf:corces_donor_BANN1030"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9173HTQL/",
"accession": "IGVFDO9173HTQL",
"aliases": [
"igvf:corces_donor_BANN0701"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7649CIGW/",
"accession": "IGVFDO7649CIGW",
"aliases": [
"igvf:corces_donor_BANN9902"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4438WASY/",
"accession": "IGVFDO4438WASY",
"aliases": [
"igvf:corces_donor_BANN1644"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7227BIXW/",
"accession": "IGVFDO7227BIXW",
"aliases": [
"igvf:corces_donor_BANN1614"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0112XZXT/",
"accession": "IGVFDO0112XZXT",
"aliases": [
"igvf:corces_donor_BANN0218"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9299YLNH/",
"accession": "IGVFDO9299YLNH",
"aliases": [
"igvf:corces_donor_BANN1921"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI5062MMWW/",
"accession": "IGVFFI5062MMWW",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L005_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:34.728767+00:00",
"file_format": "fastq",
"file_size": 1525976740,
"href": "/sequence-files/IGVFFI5062MMWW/@@download/IGVFFI5062MMWW.fastq.gz",
"md5sum": "0e5149cce41e9c73e632ec6c1c8b5938",
"s3_uri": "s3://igvf-files/2025/03/20/7e6d62b6-2d95-4e1d-bcb3-abb04d14b4c4/IGVFFI5062MMWW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L005_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0992RRCW/",
"accession": "IGVFFI0992RRCW",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:51.285028+00:00",
"file_format": "fastq",
"file_size": 362186069,
"href": "/sequence-files/IGVFFI0992RRCW/@@download/IGVFFI0992RRCW.fastq.gz",
"md5sum": "ac2dbc7b889f51266ea82bd75739eca8",
"s3_uri": "s3://igvf-files/2025/03/20/630a728b-b365-4803-a3c1-8002cddf1744/IGVFFI0992RRCW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L007_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8004MIZU/",
"accession": "IGVFFI8004MIZU",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L005_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:39.555795+00:00",
"file_format": "fastq",
"file_size": 1523747811,
"href": "/sequence-files/IGVFFI8004MIZU/@@download/IGVFFI8004MIZU.fastq.gz",
"md5sum": "5aba52347cc4c851ef898f7590119be6",
"s3_uri": "s3://igvf-files/2025/03/20/1a665231-3960-4d94-959c-dae1ef5cd65a/IGVFFI8004MIZU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L005_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6049LIRQ/",
"accession": "IGVFFI6049LIRQ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L006_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:42.052876+00:00",
"file_format": "fastq",
"file_size": 377344185,
"href": "/sequence-files/IGVFFI6049LIRQ/@@download/IGVFFI6049LIRQ.fastq.gz",
"md5sum": "d3a3b21781c503f9678f938c2592d2f7",
"s3_uri": "s3://igvf-files/2025/03/20/828981ed-2898-4875-8179-f3bf99de4953/IGVFFI6049LIRQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L006_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9237ULHA/",
"accession": "IGVFFI9237ULHA",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L005_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:32.804123+00:00",
"file_format": "fastq",
"file_size": 379816166,
"href": "/sequence-files/IGVFFI9237ULHA/@@download/IGVFFI9237ULHA.fastq.gz",
"md5sum": "c2790e9d4ddb14b422859ade26929a02",
"s3_uri": "s3://igvf-files/2025/03/20/5660ef24-4f4c-4a56-ba18-21ab3de1229f/IGVFFI9237ULHA.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L005_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1553CYJW/",
"accession": "IGVFFI1553CYJW",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:55.892451+00:00",
"file_format": "fastq",
"file_size": 831481654,
"href": "/sequence-files/IGVFFI1553CYJW/@@download/IGVFFI1553CYJW.fastq.gz",
"md5sum": "2279bbcd6ab56e684749262f1c8025ac",
"s3_uri": "s3://igvf-files/2025/03/20/cf2c3f8d-a3c2-4ce2-b6b7-1696cdd3edef/IGVFFI1553CYJW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L007_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1259GFGP/",
"accession": "IGVFFI1259GFGP",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L007_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:57.939962+00:00",
"file_format": "fastq",
"file_size": 1460139796,
"href": "/sequence-files/IGVFFI1259GFGP/@@download/IGVFFI1259GFGP.fastq.gz",
"md5sum": "478351d05c0b7244c332f14c47b319ee",
"s3_uri": "s3://igvf-files/2025/03/20/d7c4d3be-8f18-4bee-83b6-5522f647e241/IGVFFI1259GFGP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L007_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3541INTD/",
"accession": "IGVFFI3541INTD",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L008_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:07:00.932773+00:00",
"file_format": "fastq",
"file_size": 342541620,
"href": "/sequence-files/IGVFFI3541INTD/@@download/IGVFFI3541INTD.fastq.gz",
"md5sum": "9be90ea7bd8c602680af040780ebfd0e",
"s3_uri": "s3://igvf-files/2025/03/20/c6c5d881-21da-4471-80a7-9c4d738cf660/IGVFFI3541INTD.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L008_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2518GHBO/",
"accession": "IGVFFI2518GHBO",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L006_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:46.897922+00:00",
"file_format": "fastq",
"file_size": 862526540,
"href": "/sequence-files/IGVFFI2518GHBO/@@download/IGVFFI2518GHBO.fastq.gz",
"md5sum": "140faf1dc5d0b2220eaa1b8551db55d9",
"s3_uri": "s3://igvf-files/2025/03/20/e25a0d2e-8ba0-4612-805d-ed5d6069f8ca/IGVFFI2518GHBO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L006_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5643YLTE/",
"accession": "IGVFFI5643YLTE",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L006_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:49.007438+00:00",
"file_format": "fastq",
"file_size": 1517887001,
"href": "/sequence-files/IGVFFI5643YLTE/@@download/IGVFFI5643YLTE.fastq.gz",
"md5sum": "e1e53860e616e03f6163f556f9baae8d",
"s3_uri": "s3://igvf-files/2025/03/20/8a120552-0ba7-42fb-b748-1578acee3b5c/IGVFFI5643YLTE.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L006_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3978MJOW/",
"accession": "IGVFFI3978MJOW",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L005_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:36.750752+00:00",
"file_format": "fastq",
"file_size": 865031312,
"href": "/sequence-files/IGVFFI3978MJOW/@@download/IGVFFI3978MJOW.fastq.gz",
"md5sum": "e3c752fd407cfaebd874928c0d2af765",
"s3_uri": "s3://igvf-files/2025/03/20/bfbdde78-8899-4645-b7c4-059b21837d39/IGVFFI3978MJOW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L005_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2275CXDS/",
"accession": "IGVFFI2275CXDS",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L006_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:44.286374+00:00",
"file_format": "fastq",
"file_size": 1520147219,
"href": "/sequence-files/IGVFFI2275CXDS/@@download/IGVFFI2275CXDS.fastq.gz",
"md5sum": "e4808cd120fd07059a4a941256b61755",
"s3_uri": "s3://igvf-files/2025/03/20/d3b003e4-e1c3-4eda-826c-c073fd4b27de/IGVFFI2275CXDS.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L006_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6495NLJS/",
"accession": "IGVFFI6495NLJS",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:06:53.775539+00:00",
"file_format": "fastq",
"file_size": 1458746500,
"href": "/sequence-files/IGVFFI6495NLJS/@@download/IGVFFI6495NLJS.fastq.gz",
"md5sum": "3c42aee04528e3e0648f45d231328f77",
"s3_uri": "s3://igvf-files/2025/03/20/38443e96-9ddb-4332-85a5-531d7742ebb4/IGVFFI6495NLJS.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3884TQHO/",
"accession": "IGVFFI3884TQHO",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L008_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:07:03.701624+00:00",
"file_format": "fastq",
"file_size": 1376704488,
"href": "/sequence-files/IGVFFI3884TQHO/@@download/IGVFFI3884TQHO.fastq.gz",
"md5sum": "7af4f8c5df595a4390945db054835614",
"s3_uri": "s3://igvf-files/2025/03/20/7ee9582f-bb9e-44a0-896b-210b88f3eee9/IGVFFI3884TQHO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L008_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1199NQDL/",
"accession": "IGVFFI1199NQDL",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L008_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:07:06.360265+00:00",
"file_format": "fastq",
"file_size": 786874062,
"href": "/sequence-files/IGVFFI1199NQDL/@@download/IGVFFI1199NQDL.fastq.gz",
"md5sum": "937fe13a28e0968fc2994e4bf9361825",
"s3_uri": "s3://igvf-files/2025/03/20/6e11d5b8-2b7a-4302-9c5c-702642b7730e/IGVFFI1199NQDL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L008_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7980VOSL/",
"accession": "IGVFFI7980VOSL",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP002_G1_P051_L008_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:07:08.496644+00:00",
"file_format": "fastq",
"file_size": 1380060269,
"href": "/sequence-files/IGVFFI7980VOSL/@@download/IGVFFI7980VOSL.fastq.gz",
"md5sum": "c2a25c3053fd8ae303db7745039ff686",
"s3_uri": "s3://igvf-files/2025/03/20/36dc6241-da8d-4ba8-a6f4-2d19669de8c7/IGVFFI7980VOSL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP002_G1_L001_P051_S29_L008_R3_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI7587TJLC/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS3912RWNQ/",
"accession": "IGVFDS3912RWNQ",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM2125NOYE/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM2125NOYE",
"aliases": [
"igvf:corces_multiplexedSample_RP002_G1"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
},
{
"@id": "/phenotype-terms/MONDO_0004975/",
"status": "released",
"term_name": "Alzheimer disease"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T14:06:32.804123+00:00",
"summary": "single-nucleus ATAC-seq (10x multiome)",
"uuid": "488bd973-dd2a-4415-bdbf-b4aad13853a9"
}