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IGVFDS3189UXGY

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (26 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 25
buenrostro-bernstein:scATAC Lib 25

Sequencing Results (Illumina)

16 items
fastq
reads
R2
1711
6.0 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1615
6.6 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2573
980 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1519
3.5 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2381
992 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2285
988 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2477
987 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2573
571 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1423
3.8 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1615
3.9 KB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (26 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1506
  • buenrostro-bernstein:Donor 1506
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 25
  • buenrostro-bernstein:scRNA Lib 25
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad