IGVFDS3171OFHP

released
{
    "@context": "/terms/",
    "@id": "/measurement-sets/IGVFDS3171OFHP/",
    "@type": [
        "MeasurementSet",
        "FileSet",
        "Item"
    ],
    "accession": "IGVFDS3171OFHP",
    "aliases": [
        "jesse-engreitz:measurement_CRUDO_TAPseq-Auxin0hrs-Rep1"
    ],
    "assay_term": {
        "@id": "/assay-terms/OBI_0003660/",
        "term_name": "in vitro CRISPR screen using single-cell RNA-seq"
    },
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released human donor [IGVFDO0384OZRW](/human-donors/IGVFDO0384OZRW/) has in progress subobject publication [155f24ce-5c2c-4400-8651-da9447eaca25](/publications/155f24ce-5c2c-4400-8651-da9447eaca25/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/human-donors/IGVFDO0384OZRW/"
            }
        ],
        "WARNING": [
            {
                "category": "missing sequencing kit",
                "detail": "Auxiliary set [IGVFDS0282GEHF](/auxiliary-sets/IGVFDS0282GEHF/) has sequence file(s) [IGVFFI5080FNQC](/sequence-files/IGVFFI5080FNQC/), [IGVFFI0308CWCN](/sequence-files/IGVFFI0308CWCN/), [IGVFFI1051BZRQ](/sequence-files/IGVFFI1051BZRQ/), [IGVFFI2340RLRP](/sequence-files/IGVFFI2340RLRP/), [IGVFFI7481IACD](/sequence-files/IGVFFI7481IACD/), [IGVFFI7657ATAO](/sequence-files/IGVFFI7657ATAO/), [IGVFFI6529TUVF](/sequence-files/IGVFFI6529TUVF/), [IGVFFI9836SEKG](/sequence-files/IGVFFI9836SEKG/), [IGVFFI1579GEEH](/sequence-files/IGVFFI1579GEEH/), [IGVFFI6069TAYE](/sequence-files/IGVFFI6069TAYE/), [IGVFFI6689KNLG](/sequence-files/IGVFFI6689KNLG/), [IGVFFI1488GZKB](/sequence-files/IGVFFI1488GZKB/) which lack specification of a `sequencing_kit`. Sequence files should specify a sequencing kit.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_inconsistent_sequencing_kit",
                "path": "/auxiliary-sets/IGVFDS0282GEHF/"
            },
            {
                "category": "missing sequencing kit",
                "detail": "Measurement set [IGVFDS3171OFHP](/measurement-sets/IGVFDS3171OFHP/) has sequence file(s) [IGVFFI2851WWMV](/sequence-files/IGVFFI2851WWMV/), [IGVFFI0493ZORD](/sequence-files/IGVFFI0493ZORD/), [IGVFFI5644SHUR](/sequence-files/IGVFFI5644SHUR/), [IGVFFI0123WFFT](/sequence-files/IGVFFI0123WFFT/), [IGVFFI9133BYDP](/sequence-files/IGVFFI9133BYDP/), [IGVFFI9924ZSNL](/sequence-files/IGVFFI9924ZSNL/), [IGVFFI4406QWXH](/sequence-files/IGVFFI4406QWXH/), [IGVFFI0133FTES](/sequence-files/IGVFFI0133FTES/), [IGVFFI3618MDPB](/sequence-files/IGVFFI3618MDPB/), [IGVFFI5928SCMR](/sequence-files/IGVFFI5928SCMR/), [IGVFFI6981CWAL](/sequence-files/IGVFFI6981CWAL/), [IGVFFI3790XJRX](/sequence-files/IGVFFI3790XJRX/) which lack specification of a `sequencing_kit`. Sequence files should specify a sequencing kit.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_inconsistent_sequencing_kit",
                "path": "/measurement-sets/IGVFDS3171OFHP/"
            }
        ]
    },
    "auxiliary_sets": [
        {
            "@id": "/auxiliary-sets/IGVFDS0282GEHF/",
            "accession": "IGVFDS0282GEHF",
            "aliases": [
                "jesse-engreitz:auxiliary_CRUDO_TAPseq-Auxin0hrs-Rep1"
            ],
            "file_set_type": "gRNA sequencing"
        }
    ],
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization",
        "contact_pi": {
            "@id": "/users/6c75dbfa-635e-4a7a-8ec8-9e51e9c380a4/",
            "title": "Jesse Engreitz"
        },
        "title": "Stanford Center for Connecting DNA Variants to Function and Phenotype"
    },
    "control_for": [],
    "creation_timestamp": "2024-05-23T22:48:10.883999+00:00",
    "documents": [
        "/documents/74d53b9c-ab1d-42e3-b679-d3a00ae3d842/"
    ],
    "donors": [
        {
            "@id": "/human-donors/IGVFDO0384OZRW/",
            "accession": "IGVFDO0384OZRW",
            "aliases": [
                "igvf:donor_of_HCT116"
            ],
            "sex": "male",
            "status": "released",
            "taxa": "Homo sapiens"
        }
    ],
    "file_set_type": "experimental data",
    "files": [
        {
            "@id": "/sequence-files/IGVFFI2851WWMV/",
            "accession": "IGVFFI2851WWMV",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S2_R1"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T19:08:08.665950+00:00",
            "file_format": "fastq",
            "file_size": 1192632205,
            "href": "/sequence-files/IGVFFI2851WWMV/@@download/IGVFFI2851WWMV.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/910fabf6-af6a-4c4e-90b3-947d0f919da4/IGVFFI2851WWMV.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L002_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI0493ZORD/",
            "accession": "IGVFFI0493ZORD",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S4_R2"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T19:09:24.559787+00:00",
            "file_format": "fastq",
            "file_size": 2786763203,
            "href": "/sequence-files/IGVFFI0493ZORD/@@download/IGVFFI0493ZORD.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/59763323-609d-4946-8b3a-c33e60279701/IGVFFI0493ZORD.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L004_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI5644SHUR/",
            "accession": "IGVFFI5644SHUR",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S3_R2"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T19:08:52.683103+00:00",
            "file_format": "fastq",
            "file_size": 2823690756,
            "href": "/sequence-files/IGVFFI5644SHUR/@@download/IGVFFI5644SHUR.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/5320411b-ee3e-4ff5-a42c-24b425f414ac/IGVFFI5644SHUR.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L003_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI0123WFFT/",
            "accession": "IGVFFI0123WFFT",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S1_R1"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T18:12:28.807286+00:00",
            "file_format": "fastq",
            "file_size": 1224596451,
            "href": "/sequence-files/IGVFFI0123WFFT/@@download/IGVFFI0123WFFT.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/9d97a10b-6294-4ba9-9da2-e0874d95b0d5/IGVFFI0123WFFT.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L001_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI9133BYDP/",
            "accession": "IGVFFI9133BYDP",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S3_R1"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T19:08:43.022024+00:00",
            "file_format": "fastq",
            "file_size": 1259108304,
            "href": "/sequence-files/IGVFFI9133BYDP/@@download/IGVFFI9133BYDP.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/93c42aec-dbd7-4bac-861c-32c0122ddab3/IGVFFI9133BYDP.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L003_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI9924ZSNL/",
            "accession": "IGVFFI9924ZSNL",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S1_R2"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T19:05:14.761964+00:00",
            "file_format": "fastq",
            "file_size": 2779679606,
            "href": "/sequence-files/IGVFFI9924ZSNL/@@download/IGVFFI9924ZSNL.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/9c2e5c77-a65b-43ae-b4cc-2c282449554d/IGVFFI9924ZSNL.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L001_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI4406QWXH/",
            "accession": "IGVFFI4406QWXH",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S2_I1"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T19:08:31.738487+00:00",
            "file_format": "fastq",
            "file_size": 361693054,
            "href": "/sequence-files/IGVFFI4406QWXH/@@download/IGVFFI4406QWXH.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/4dfaa8c2-7d4d-444e-ad5a-97648eb98e97/IGVFFI4406QWXH.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L002_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI0133FTES/",
            "accession": "IGVFFI0133FTES",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S1_I1"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T19:05:31.787933+00:00",
            "file_format": "fastq",
            "file_size": 369437466,
            "href": "/sequence-files/IGVFFI0133FTES/@@download/IGVFFI0133FTES.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/fdcc28b8-bea0-4a4e-9364-ca9c99414112/IGVFFI0133FTES.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L001_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI3618MDPB/",
            "accession": "IGVFFI3618MDPB",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S2_R2"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T19:08:17.072611+00:00",
            "file_format": "fastq",
            "file_size": 2711892174,
            "href": "/sequence-files/IGVFFI3618MDPB/@@download/IGVFFI3618MDPB.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/a0a87998-d163-471a-912d-854166aee6ec/IGVFFI3618MDPB.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L002_R2_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI5928SCMR/",
            "accession": "IGVFFI5928SCMR",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S4_R1"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T19:09:15.385067+00:00",
            "file_format": "fastq",
            "file_size": 1237846281,
            "href": "/sequence-files/IGVFFI5928SCMR/@@download/IGVFFI5928SCMR.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/a81c5702-0534-43e5-a8de-1f69ddd8548f/IGVFFI5928SCMR.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L004_R1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI6981CWAL/",
            "accession": "IGVFFI6981CWAL",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S4_I1"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T19:09:40.460879+00:00",
            "file_format": "fastq",
            "file_size": 370585254,
            "href": "/sequence-files/IGVFFI6981CWAL/@@download/IGVFFI6981CWAL.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/04eb7a9a-e3e1-4681-bbf7-720770149e64/IGVFFI6981CWAL.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L004_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/sequence-files/IGVFFI3790XJRX/",
            "accession": "IGVFFI3790XJRX",
            "aliases": [
                "jesse-engreitz:measurement_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S3_I1"
            ],
            "content_type": "reads",
            "creation_timestamp": "2024-06-03T19:09:07.793492+00:00",
            "file_format": "fastq",
            "file_size": 374523366,
            "href": "/sequence-files/IGVFFI3790XJRX/@@download/IGVFFI3790XJRX.fastq.gz",
            "s3_uri": "s3://igvf-files/2024/06/03/b09e1163-bc25-41a2-9a1e-4c022f47a608/IGVFFI3790XJRX.fastq.gz",
            "sequencing_platform": {
                "@id": "/platform-terms/EFO_0008566/",
                "term_name": "Illumina NextSeq 550"
            },
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L360_S1_L003_I1_001.fastq.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/configuration-files/IGVFFI7450ALAX/",
            "accession": "IGVFFI7450ALAX",
            "aliases": [
                "jesse-engreitz:seqspecfile_rna_CRUDO_TAPseq_Auxin0hrs-Rep1-S1"
            ],
            "content_type": "seqspec",
            "creation_timestamp": "2024-06-20T17:15:00.305983+00:00",
            "file_format": "yaml",
            "file_size": 1044,
            "href": "/configuration-files/IGVFFI7450ALAX/@@download/IGVFFI7450ALAX.yaml.gz",
            "s3_uri": "s3://igvf-files/2024/06/20/5873c73c-8c3e-4be6-8601-32b08ac90270/IGVFFI7450ALAX.yaml.gz",
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/240410_IGVF_upload/seqspec/tapseq_seqspec.out.Auxin0hrs-Rep1-S1.rna.yaml.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/configuration-files/IGVFFI2574ZRKS/",
            "accession": "IGVFFI2574ZRKS",
            "aliases": [
                "jesse-engreitz:seqspecfile_rna_CRUDO_TAPseq_Auxin0hrs-Rep1-S2"
            ],
            "content_type": "seqspec",
            "creation_timestamp": "2024-06-20T17:15:39.416569+00:00",
            "file_format": "yaml",
            "file_size": 1047,
            "href": "/configuration-files/IGVFFI2574ZRKS/@@download/IGVFFI2574ZRKS.yaml.gz",
            "s3_uri": "s3://igvf-files/2024/06/20/c8e6d658-4e32-4b1b-8b2c-ec4685586652/IGVFFI2574ZRKS.yaml.gz",
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/240410_IGVF_upload/seqspec/tapseq_seqspec.out.Auxin0hrs-Rep1-S2.rna.yaml.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/configuration-files/IGVFFI3146GSKQ/",
            "accession": "IGVFFI3146GSKQ",
            "aliases": [
                "jesse-engreitz:seqspecfile_rna_CRUDO_TAPseq_Auxin0hrs-Rep1-S3"
            ],
            "content_type": "seqspec",
            "creation_timestamp": "2024-06-20T17:15:46.641096+00:00",
            "file_format": "yaml",
            "file_size": 1047,
            "href": "/configuration-files/IGVFFI3146GSKQ/@@download/IGVFFI3146GSKQ.yaml.gz",
            "s3_uri": "s3://igvf-files/2024/06/20/d135203f-3004-489e-aca9-ade574985f01/IGVFFI3146GSKQ.yaml.gz",
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/240410_IGVF_upload/seqspec/tapseq_seqspec.out.Auxin0hrs-Rep1-S3.rna.yaml.gz",
            "upload_status": "validated"
        },
        {
            "@id": "/configuration-files/IGVFFI8706AAXI/",
            "accession": "IGVFFI8706AAXI",
            "aliases": [
                "jesse-engreitz:seqspecfile_rna_CRUDO_TAPseq_Auxin0hrs-Rep1-S4"
            ],
            "content_type": "seqspec",
            "creation_timestamp": "2024-06-20T17:15:51.939132+00:00",
            "file_format": "yaml",
            "file_size": 1046,
            "href": "/configuration-files/IGVFFI8706AAXI/@@download/IGVFFI8706AAXI.yaml.gz",
            "s3_uri": "s3://igvf-files/2024/06/20/da7a9171-f35d-4589-ab6d-be34de096676/IGVFFI8706AAXI.yaml.gz",
            "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/240410_IGVF_upload/seqspec/tapseq_seqspec.out.Auxin0hrs-Rep1-S4.rna.yaml.gz",
            "upload_status": "validated"
        }
    ],
    "input_file_set_for": [
        "/analysis-sets/IGVFDS5308EMCG/"
    ],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "notes": "The readout 86015c12-b9a6-43ba-9601-5d75aab4d39c was removed from this measurement set.",
    "preferred_assay_title": "TAP-seq",
    "protocols": [
        "https://www.protocols.io/view/crispri-of-regulatory-elements-upon-degron-operati-5jyl82d59l2w/v1"
    ],
    "release_timestamp": "2024-07-10T19:53:21.427662+00:00",
    "samples": [
        {
            "@id": "/in-vitro-systems/IGVFSM5799ZEJH/",
            "@type": [
                "InVitroSystem",
                "Biosample",
                "Sample",
                "Item"
            ],
            "accession": "IGVFSM5799ZEJH",
            "aliases": [
                "jesse-engreitz:in-vitro-system_CRUDO_TAPseq-Auxin0hrs-Rep1"
            ],
            "classifications": [
                "cell line"
            ],
            "construct_library_sets": [
                {
                    "@id": "/construct-library-sets/IGVFDS9869EMNE/",
                    "accession": "IGVFDS9869EMNE",
                    "file_set_type": "guide library",
                    "summary": "Guide (sgRNA) library targeting accessible genome regions in 29 genomic loci"
                }
            ],
            "modifications": [
                {
                    "@id": "/crispr-modifications/8543fa06-1720-4e7d-8e8f-7e24c1b1cf79/",
                    "modality": "interference"
                }
            ],
            "sample_terms": [
                {
                    "@id": "/sample-terms/EFO_0002824/",
                    "@type": [
                        "SampleTerm",
                        "OntologyTerm",
                        "Item"
                    ],
                    "aliases": [
                        "igvf:HCT116"
                    ],
                    "status": "released",
                    "summary": "HCT116",
                    "term_name": "HCT116"
                }
            ],
            "status": "released",
            "summary": "HCT116 cell line, male, Homo sapiens modified with a guide library",
            "taxa": "Homo sapiens"
        }
    ],
    "schema_version": "21",
    "status": "released",
    "submitted_by": {
        "@id": "/users/3bd6f74c-8cf3-4c35-a94d-0c7c11654815/",
        "title": "Chongyon Park"
    },
    "submitted_files_timestamp": "2024-06-03T18:12:28.807286+00:00",
    "summary": "TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci",
    "uuid": "b29dea8d-86be-4e17-ba2c-644ec13112a8"
}