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INDEXED
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MeasurementSet
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IGVFDS3140XYDB
IGVFDS3140XYDB
released
Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 7 days
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C37_day7
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0511UJTO
fastq
reads
R1
1
Illumina NovaSeq X
1
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI0883PYVE
fastq
reads
R1
1
Illumina NovaSeq X
6
3.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI2254HUQZ
fastq
reads
R1
1
Illumina NovaSeq X
2
2.9 GB
Chongyuan Luo, UCLA
validated
IGVFFI2415XAUE
fastq
reads
R2
2
Illumina NovaSeq X
3
3.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI2858BCQB
fastq
reads
R2
2
Illumina NovaSeq X
4
3.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI3152GMOL
fastq
reads
R1
1
Illumina NovaSeq X
5
3.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI3625GHKS
fastq
reads
R2
2
Illumina NovaSeq X
6
3.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI4724QNJY
fastq
reads
R1
1
Illumina NovaSeq X
8
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI6396LUZG
fastq
reads
R1
1
Illumina NovaSeq X
3
2.9 GB
Chongyuan Luo, UCLA
validated
IGVFFI6619EWUD
fastq
reads
R2
2
Illumina NovaSeq X
2
3.0 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM8061EIMU
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 7 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO0351NYZH
chongyuan-luo:C37
unspecified
Homo sapiens