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IGVFDS2737CQNK

released
File Set Type
experimental data
Summary
ATAC-seq integrating an expression vector library of BATF3
Assay Term
bulk assay for transposase-accessible chromatin using sequencing
Sample Summaries
  • Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead, transduced (lentivirus) with a expression vector library
Protocols
Aliases
charles-gersbach:cd8-tcells-atac-seq-acute-activation-batf3-rep2
Publications
Attribution
Charles Gersbach, Duke

Sequencing Results (Illumina)

2 items
Read Names
fastq
reads
R1
2
1
1.0 GB
Charles Gersbach, Duke
validated
fastq
reads
R2
2
1
1.0 GB
Charles Gersbach, Duke
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
PrimaryCell
Homo sapiens CD8-positive, alpha-beta memory T cell treated with 300 percent Antibody Coated Bead, transduced (lentivirus) with a expression vector library

Donors

1 item
Accession
Aliases
Sex
Taxa
  • charles-gersbach:cd8-tcells-donor-10
unspecified
Homo sapiens

Associated Construct Library Sets

1 item
Accession
Summary
Library Design Files
expression vector library of BATF3

Control File Sets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
control transduction ATAC-seq integrating a control transduction expression vector library
  • charles-gersbach:cd8-tcells-atac-seq-acute-activation-gfp-rep2
Charles Gersbach, Duke

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
ATAC-seq: alignments, fold change over control, peak quantifications
  • charles-gersbach:cd8-tcells-analysis-set-atac-seq-acute-activation-batf3
Charles Gersbach, Duke