{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS2585XWPY/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS2585XWPY",
"aliases": [
"igvf:corces_measurementSet_RP007_G5_RNA"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [2c783c74-fa89-4766-b218-3e0da350c6da](/phenotypic-features/2c783c74-fa89-4766-b218-3e0da350c6da/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [a0a18d18-51af-4fbc-9a8c-baa6f6b720cd](/phenotypic-features/a0a18d18-51af-4fbc-9a8c-baa6f6b720cd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [48e0e9c9-7759-4913-8219-2471979d793e](/phenotypic-features/48e0e9c9-7759-4913-8219-2471979d793e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [c2f14d65-c7f8-46d1-8093-818906473518](/phenotypic-features/c2f14d65-c7f8-46d1-8093-818906473518/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [5206796d-df44-42d5-a495-92cfc4ef55c6](/phenotypic-features/5206796d-df44-42d5-a495-92cfc4ef55c6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [a393f393-5482-4671-b57c-fe8bfe6e8927](/phenotypic-features/a393f393-5482-4671-b57c-fe8bfe6e8927/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [ab7e4cfe-ea26-4525-ab85-dd11e60815e3](/phenotypic-features/ab7e4cfe-ea26-4525-ab85-dd11e60815e3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [416ac19b-be8b-4230-b781-ac2ad4d72ca0](/phenotypic-features/416ac19b-be8b-4230-b781-ac2ad4d72ca0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [d5720da2-f518-4f62-ab22-531e43e00201](/phenotypic-features/d5720da2-f518-4f62-ab22-531e43e00201/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [101b5ed8-c92e-433b-a591-b7bef11037b5](/phenotypic-features/101b5ed8-c92e-433b-a591-b7bef11037b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [c720825e-ee74-4c36-8a5e-9c70924435be](/phenotypic-features/c720825e-ee74-4c36-8a5e-9c70924435be/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [a307f67e-a27c-4f71-933b-8391d36a0ffc](/phenotypic-features/a307f67e-a27c-4f71-933b-8391d36a0ffc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [9c586031-f537-409b-8205-585a19621b3f](/phenotypic-features/9c586031-f537-409b-8205-585a19621b3f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [1e832ff1-71d0-41fc-9f36-fd4498dfee00](/phenotypic-features/1e832ff1-71d0-41fc-9f36-fd4498dfee00/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [687e8b69-25f0-4bb5-969e-635dd2d3f4a5](/phenotypic-features/687e8b69-25f0-4bb5-969e-635dd2d3f4a5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [f6830b8c-bd31-4ecc-868b-9167f991411f](/phenotypic-features/f6830b8c-bd31-4ecc-868b-9167f991411f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [379eea64-a47e-4b72-9c55-562a0998a7be](/phenotypic-features/379eea64-a47e-4b72-9c55-562a0998a7be/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [73d02d35-b7a0-4250-9e20-8fe585c949ff](/phenotypic-features/73d02d35-b7a0-4250-9e20-8fe585c949ff/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [c7893559-54d2-4768-bfcc-e705d88c884d](/phenotypic-features/c7893559-54d2-4768-bfcc-e705d88c884d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [5c7de610-9d77-4450-b755-6296339a9a06](/phenotypic-features/5c7de610-9d77-4450-b755-6296339a9a06/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [58ee8a7b-2d6c-4319-a3ed-659f8f4bd2ad](/phenotypic-features/58ee8a7b-2d6c-4319-a3ed-659f8f4bd2ad/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [2d016559-41a5-4d0d-a206-e9b31fadb322](/phenotypic-features/2d016559-41a5-4d0d-a206-e9b31fadb322/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [fcb965cc-7b61-4d20-822d-bd5a898093b5](/phenotypic-features/fcb965cc-7b61-4d20-822d-bd5a898093b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [20ce9114-8f44-47dc-b1ff-6a44688bf47a](/phenotypic-features/20ce9114-8f44-47dc-b1ff-6a44688bf47a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [cf42e423-497d-4ce1-b16c-de4b75c47c15](/phenotypic-features/cf42e423-497d-4ce1-b16c-de4b75c47c15/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [ea3dee25-4ac9-4957-a68d-c098ce615ca3](/phenotypic-features/ea3dee25-4ac9-4957-a68d-c098ce615ca3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [4ce05436-3aba-4ff2-adfe-7b35c9701431](/phenotypic-features/4ce05436-3aba-4ff2-adfe-7b35c9701431/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [6a8d3945-6600-4f71-bc2d-3aa7cd079713](/phenotypic-features/6a8d3945-6600-4f71-bc2d-3aa7cd079713/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [721cdbe5-854d-428a-85b6-a444e6fe94c3](/phenotypic-features/721cdbe5-854d-428a-85b6-a444e6fe94c3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [793031fc-a40d-4951-9abf-09dcf84149cb](/phenotypic-features/793031fc-a40d-4951-9abf-09dcf84149cb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [c9ecdf8e-7c0f-473e-a8be-77797167794c](/phenotypic-features/c9ecdf8e-7c0f-473e-a8be-77797167794c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [29048a47-9d7d-4ad1-bc30-b97bd2c5e4d7](/phenotypic-features/29048a47-9d7d-4ad1-bc30-b97bd2c5e4d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [95491ef2-b590-4c18-b81d-6c903ed626a4](/phenotypic-features/95491ef2-b590-4c18-b81d-6c903ed626a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8800RKVB](/human-donors/IGVFDO8800RKVB/) has in progress subobject phenotypic feature [0ba97096-19d9-4d59-873a-9ca2c42354f0](/phenotypic-features/0ba97096-19d9-4d59-873a-9ca2c42354f0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8800RKVB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8800RKVB](/human-donors/IGVFDO8800RKVB/) has in progress subobject phenotypic feature [4bba57b2-fe4e-46c7-ace5-64469134b74a](/phenotypic-features/4bba57b2-fe4e-46c7-ace5-64469134b74a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8800RKVB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8800RKVB](/human-donors/IGVFDO8800RKVB/) has in progress subobject phenotypic feature [1e6fcee5-5039-4c6f-86fc-6271a4ccbc72](/phenotypic-features/1e6fcee5-5039-4c6f-86fc-6271a4ccbc72/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8800RKVB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8800RKVB](/human-donors/IGVFDO8800RKVB/) has in progress subobject phenotypic feature [4f2de9a0-55d4-4474-973d-63b58cb1b930](/phenotypic-features/4f2de9a0-55d4-4474-973d-63b58cb1b930/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8800RKVB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8800RKVB](/human-donors/IGVFDO8800RKVB/) has in progress subobject phenotypic feature [d42b2763-dab2-4434-a2ff-90f908a90db1](/phenotypic-features/d42b2763-dab2-4434-a2ff-90f908a90db1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8800RKVB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [688afed8-9edc-4232-aad4-2342093c1c09](/phenotypic-features/688afed8-9edc-4232-aad4-2342093c1c09/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [088a9bc3-3c47-43fb-a433-e98b083f05b0](/phenotypic-features/088a9bc3-3c47-43fb-a433-e98b083f05b0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c474daa4-7513-404e-94d5-875f37a7c343](/phenotypic-features/c474daa4-7513-404e-94d5-875f37a7c343/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [bd6f3062-edeb-4a6b-8894-efd13d5f6d1a](/phenotypic-features/bd6f3062-edeb-4a6b-8894-efd13d5f6d1a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [a0d65347-a21f-439b-bd5d-7232f0b1ee5e](/phenotypic-features/a0d65347-a21f-439b-bd5d-7232f0b1ee5e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c2483f59-ee42-47e9-855b-4121902f7e6e](/phenotypic-features/c2483f59-ee42-47e9-855b-4121902f7e6e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [21180334-b9e1-4c74-93e8-88a02b7e21a4](/phenotypic-features/21180334-b9e1-4c74-93e8-88a02b7e21a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [bc1a71d4-776d-49f9-8119-1bb7ebc736b5](/phenotypic-features/bc1a71d4-776d-49f9-8119-1bb7ebc736b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [84af69f8-2342-470e-a2e8-49c3d9ad9e49](/phenotypic-features/84af69f8-2342-470e-a2e8-49c3d9ad9e49/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [992572c7-9a8c-4b52-8e07-cf9c9b7c9ecd](/phenotypic-features/992572c7-9a8c-4b52-8e07-cf9c9b7c9ecd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [cc110bac-e1d1-42b9-a9a0-d50c2dee4d59](/phenotypic-features/cc110bac-e1d1-42b9-a9a0-d50c2dee4d59/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9173HTQL](/human-donors/IGVFDO9173HTQL/) has in progress subobject phenotypic feature [486706cb-1a67-4693-9a5a-20c604cc2976](/phenotypic-features/486706cb-1a67-4693-9a5a-20c604cc2976/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9173HTQL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [9e1ef8ad-9ca2-471a-b9f8-861c43a2d643](/phenotypic-features/9e1ef8ad-9ca2-471a-b9f8-861c43a2d643/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [076a6fa7-1eec-479d-baae-93da0b5812c4](/phenotypic-features/076a6fa7-1eec-479d-baae-93da0b5812c4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [7d5fed93-7936-473e-8fa3-16d013205c27](/phenotypic-features/7d5fed93-7936-473e-8fa3-16d013205c27/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [e8ffe241-f099-4ec4-90fe-c8e355fd2ae5](/phenotypic-features/e8ffe241-f099-4ec4-90fe-c8e355fd2ae5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [d6465499-8253-4073-8c50-1cf8deb110dc](/phenotypic-features/d6465499-8253-4073-8c50-1cf8deb110dc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7051PRHR](/human-donors/IGVFDO7051PRHR/) has in progress subobject phenotypic feature [9687710e-1657-496d-a39a-02a10f0c7fcb](/phenotypic-features/9687710e-1657-496d-a39a-02a10f0c7fcb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7051PRHR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [d900f184-9bf7-4b9c-8d20-0d40c6b16435](/phenotypic-features/d900f184-9bf7-4b9c-8d20-0d40c6b16435/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [1961d5fc-9987-47f0-8cdf-9dae2203185c](/phenotypic-features/1961d5fc-9987-47f0-8cdf-9dae2203185c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [93e7b543-5ab9-4cb4-8a10-9d9a7b950b6b](/phenotypic-features/93e7b543-5ab9-4cb4-8a10-9d9a7b950b6b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [cd2525eb-a90d-47c1-a053-cd3376cd23d1](/phenotypic-features/cd2525eb-a90d-47c1-a053-cd3376cd23d1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [025a53bb-7c23-42cb-9752-3516f17f6187](/phenotypic-features/025a53bb-7c23-42cb-9752-3516f17f6187/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [ef944fd3-8635-4e0f-bad8-48136e7c6408](/phenotypic-features/ef944fd3-8635-4e0f-bad8-48136e7c6408/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2928PSUK](/human-donors/IGVFDO2928PSUK/) has in progress subobject phenotypic feature [dd397a17-7e16-4a28-a82d-d049e2ff0909](/phenotypic-features/dd397a17-7e16-4a28-a82d-d049e2ff0909/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2928PSUK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2928PSUK](/human-donors/IGVFDO2928PSUK/) has in progress subobject phenotypic feature [e0465b6a-9430-4bef-8e1d-96539652f0da](/phenotypic-features/e0465b6a-9430-4bef-8e1d-96539652f0da/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2928PSUK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2928PSUK](/human-donors/IGVFDO2928PSUK/) has in progress subobject phenotypic feature [616514de-d080-41fc-b8cd-84e4413e9ca5](/phenotypic-features/616514de-d080-41fc-b8cd-84e4413e9ca5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2928PSUK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2928PSUK](/human-donors/IGVFDO2928PSUK/) has in progress subobject phenotypic feature [26624140-d75b-4a14-843a-657380f19783](/phenotypic-features/26624140-d75b-4a14-843a-657380f19783/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2928PSUK/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS2585XWPY](/measurement-sets/IGVFDS2585XWPY/) has sequence file(s): [IGVFFI8857PSUD](/sequence-files/IGVFFI8857PSUD/), [IGVFFI3813EHEG](/sequence-files/IGVFFI3813EHEG/), [IGVFFI8047XIYF](/sequence-files/IGVFFI8047XIYF/), [IGVFFI4103RLIR](/sequence-files/IGVFFI4103RLIR/), [IGVFFI6936CAHY](/sequence-files/IGVFFI6936CAHY/), [IGVFFI2728HGAJ](/sequence-files/IGVFFI2728HGAJ/), [IGVFFI7941BWMO](/sequence-files/IGVFFI7941BWMO/), [IGVFFI4762WOWZ](/sequence-files/IGVFFI4762WOWZ/), [IGVFFI7063IFJF](/sequence-files/IGVFFI7063IFJF/), [IGVFFI5110BHGV](/sequence-files/IGVFFI5110BHGV/), [IGVFFI7583FWIN](/sequence-files/IGVFFI7583FWIN/), [IGVFFI1178TXIF](/sequence-files/IGVFFI1178TXIF/), [IGVFFI1560IEHW](/sequence-files/IGVFFI1560IEHW/), [IGVFFI4080EPAW](/sequence-files/IGVFFI4080EPAW/), [IGVFFI7381AVTJ](/sequence-files/IGVFFI7381AVTJ/), [IGVFFI8467JGPW](/sequence-files/IGVFFI8467JGPW/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS2585XWPY/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS2585XWPY](/measurement-sets/IGVFDS2585XWPY/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS2585XWPY/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS2585XWPY](/measurement-sets/IGVFDS2585XWPY/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS2585XWPY/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T21:41:25.044177+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO7051PRHR/",
"accession": "IGVFDO7051PRHR",
"aliases": [
"igvf:corces_donor_BANN1234"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4438WASY/",
"accession": "IGVFDO4438WASY",
"aliases": [
"igvf:corces_donor_BANN1644"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7109IWDJ/",
"accession": "IGVFDO7109IWDJ",
"aliases": [
"igvf:corces_donor_BANN2005"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0802OVOD/",
"accession": "IGVFDO0802OVOD",
"aliases": [
"igvf:corces_donor_BANN1030"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8344LUQZ/",
"accession": "IGVFDO8344LUQZ",
"aliases": [
"igvf:corces_donor_BANN0621"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9173HTQL/",
"accession": "IGVFDO9173HTQL",
"aliases": [
"igvf:corces_donor_BANN0701"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7387JZDV/",
"accession": "IGVFDO7387JZDV",
"aliases": [
"igvf:corces_donor_BANN1349"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9028PIDF/",
"accession": "IGVFDO9028PIDF",
"aliases": [
"igvf:corces_donor_BANN1637"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9211DWXZ/",
"accession": "IGVFDO9211DWXZ",
"aliases": [
"igvf:corces_donor_BANN1352"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8800RKVB/",
"accession": "IGVFDO8800RKVB",
"aliases": [
"igvf:corces_donor_BANN1872"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2928PSUK/",
"accession": "IGVFDO2928PSUK",
"aliases": [
"igvf:corces_donor_BANN0950"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4825ZGIS/",
"accession": "IGVFDO4825ZGIS",
"aliases": [
"igvf:corces_donor_BANN2057"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI8857PSUD/",
"accession": "IGVFFI8857PSUD",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L008_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:11:06.464947+00:00",
"file_format": "fastq",
"file_size": 2756056301,
"href": "/sequence-files/IGVFFI8857PSUD/@@download/IGVFFI8857PSUD.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/c2989388-2c0c-4f07-8cdd-622113658405/IGVFFI8857PSUD.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S92_L008_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3813EHEG/",
"accession": "IGVFFI3813EHEG",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L007_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:10:47.245459+00:00",
"file_format": "fastq",
"file_size": 434020539,
"href": "/sequence-files/IGVFFI3813EHEG/@@download/IGVFFI3813EHEG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/5b09f4ae-2223-40dd-a1b2-8ce6c7eedd50/IGVFFI3813EHEG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S92_L007_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8047XIYF/",
"accession": "IGVFFI8047XIYF",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:10:52.666185+00:00",
"file_format": "fastq",
"file_size": 2961941500,
"href": "/sequence-files/IGVFFI8047XIYF/@@download/IGVFFI8047XIYF.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/cb05d2aa-b1a4-4b4e-8267-1de6b9e97417/IGVFFI8047XIYF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S92_L007_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4103RLIR/",
"accession": "IGVFFI4103RLIR",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L003_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:19:10.382730+00:00",
"file_format": "fastq",
"file_size": 423344809,
"href": "/sequence-files/IGVFFI4103RLIR/@@download/IGVFFI4103RLIR.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/030802e4-528d-4802-90db-76d12143b459/IGVFFI4103RLIR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S33_L003_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6936CAHY/",
"accession": "IGVFFI6936CAHY",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L008_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:10:59.462311+00:00",
"file_format": "fastq",
"file_size": 405877504,
"href": "/sequence-files/IGVFFI6936CAHY/@@download/IGVFFI6936CAHY.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/fca5aec0-0f07-41c6-96f5-4ec656cb9f57/IGVFFI6936CAHY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S92_L008_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2728HGAJ/",
"accession": "IGVFFI2728HGAJ",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:10:49.416139+00:00",
"file_format": "fastq",
"file_size": 1375025008,
"href": "/sequence-files/IGVFFI2728HGAJ/@@download/IGVFFI2728HGAJ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/05756177-2056-4df9-80f1-da38c25e68a3/IGVFFI2728HGAJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S92_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7941BWMO/",
"accession": "IGVFFI7941BWMO",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L003_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:19:19.575145+00:00",
"file_format": "fastq",
"file_size": 3084020084,
"href": "/sequence-files/IGVFFI7941BWMO/@@download/IGVFFI7941BWMO.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/64bac2d7-60e6-45df-a876-541037c6a74e/IGVFFI7941BWMO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S33_L003_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4762WOWZ/",
"accession": "IGVFFI4762WOWZ",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L008_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:11:02.739174+00:00",
"file_format": "fastq",
"file_size": 1278585180,
"href": "/sequence-files/IGVFFI4762WOWZ/@@download/IGVFFI4762WOWZ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b7ca244c-bf24-421e-8dd2-1a66f967c1a9/IGVFFI4762WOWZ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S92_L008_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7063IFJF/",
"accession": "IGVFFI7063IFJF",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L003_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:19:16.426625+00:00",
"file_format": "fastq",
"file_size": 1440243532,
"href": "/sequence-files/IGVFFI7063IFJF/@@download/IGVFFI7063IFJF.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/287d989a-5252-4661-88e0-f45ce87c5bd1/IGVFFI7063IFJF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S33_L003_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5110BHGV/",
"accession": "IGVFFI5110BHGV",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L008_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:10:56.215034+00:00",
"file_format": "fastq",
"file_size": 375373545,
"href": "/sequence-files/IGVFFI5110BHGV/@@download/IGVFFI5110BHGV.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/399e2c55-e5cb-4bd7-93da-3a7b22119e83/IGVFFI5110BHGV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S92_L008_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7583FWIN/",
"accession": "IGVFFI7583FWIN",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L004_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:19:29.027112+00:00",
"file_format": "fastq",
"file_size": 1474050810,
"href": "/sequence-files/IGVFFI7583FWIN/@@download/IGVFFI7583FWIN.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/1f922b44-0df7-4d9a-9d31-39591160f280/IGVFFI7583FWIN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S33_L004_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1178TXIF/",
"accession": "IGVFFI1178TXIF",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:10:43.783984+00:00",
"file_format": "fastq",
"file_size": 402733664,
"href": "/sequence-files/IGVFFI1178TXIF/@@download/IGVFFI1178TXIF.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/64b1951e-964a-497f-b07e-2cfd55a54d8c/IGVFFI1178TXIF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S92_L007_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1560IEHW/",
"accession": "IGVFFI1560IEHW",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L003_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:19:13.260307+00:00",
"file_format": "fastq",
"file_size": 466072846,
"href": "/sequence-files/IGVFFI1560IEHW/@@download/IGVFFI1560IEHW.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/83ca8710-9f56-46dd-a21a-aa00cb263961/IGVFFI1560IEHW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S33_L003_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4080EPAW/",
"accession": "IGVFFI4080EPAW",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L004_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:19:25.767946+00:00",
"file_format": "fastq",
"file_size": 478204977,
"href": "/sequence-files/IGVFFI4080EPAW/@@download/IGVFFI4080EPAW.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/4a36182c-87a5-407c-a320-d4397d2fbc5c/IGVFFI4080EPAW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S33_L004_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7381AVTJ/",
"accession": "IGVFFI7381AVTJ",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L004_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:19:22.787183+00:00",
"file_format": "fastq",
"file_size": 435477553,
"href": "/sequence-files/IGVFFI7381AVTJ/@@download/IGVFFI7381AVTJ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/d73c377f-6e2a-4577-8dcd-e59d6eae265a/IGVFFI7381AVTJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S33_L004_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8467JGPW/",
"accession": "IGVFFI8467JGPW",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP007_G5_P056_L004_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:22:48.886488+00:00",
"file_format": "fastq",
"file_size": 3147758710,
"href": "/sequence-files/IGVFFI8467JGPW/@@download/IGVFFI8467JGPW.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/008c6717-d32b-460a-9346-db522f19ab53/IGVFFI8467JGPW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP007_G5_L005_P056_S33_L004_R2_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI8751YQRY/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS8885GAJV/",
"accession": "IGVFDS8885GAJV",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM2276WIKG/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM2276WIKG",
"aliases": [
"igvf:corces_multiplexedSample_RP007_G5"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T16:10:43.783984+00:00",
"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "edf89f84-6cd1-4c5d-8276-2cc51546cc38"
}