{
"@context": "/terms/",
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"FileSet",
"Item"
],
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],
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],
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},
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{
"category": "missing publication",
"detail": "Measurement set [IGVFDS2534CJYA](/measurement-sets/IGVFDS2534CJYA/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS2534CJYA/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS2534CJYA](/measurement-sets/IGVFDS2534CJYA/) has in progress subobject tabular file [IGVFFI4393VVCW](/tabular-files/IGVFFI4393VVCW/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS2534CJYA/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS2534CJYA](/measurement-sets/IGVFDS2534CJYA/) has in progress subobject tabular file [IGVFFI9683HRGJ](/tabular-files/IGVFFI9683HRGJ/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS2534CJYA/"
},
{
"category": "mismatched status",
"detail": "Released in vitro system [IGVFSM7625PGWV](/in-vitro-systems/IGVFSM7625PGWV/) has in progress subobject source [jason-buenrostro](/sources/jason-buenrostro/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/in-vitro-systems/IGVFSM7625PGWV/"
},
{
"category": "missing publication",
"detail": "In vitro system [IGVFSM7625PGWV](/in-vitro-systems/IGVFSM7625PGWV/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM7625PGWV/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS2534CJYA](/measurement-sets/IGVFDS2534CJYA/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS2534CJYA/"
}
]
},
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"title": "Jason Buenrostro"
},
"title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
},
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],
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{
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},
{
"@id": "/human-donors/IGVFDO1048RJRX/",
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},
{
"@id": "/human-donors/IGVFDO9637UZMV/",
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],
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},
{
"@id": "/human-donors/IGVFDO7463WRZR/",
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],
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},
{
"@id": "/human-donors/IGVFDO8630TWDU/",
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{
"@id": "/human-donors/IGVFDO3401QPKA/",
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],
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}
],
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},
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"@id": "/sequence-files/IGVFFI9831SEGU/",
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"@id": "/sequence-files/IGVFFI8905WBYU/",
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"creation_timestamp": "2025-02-20T20:47:14.838444+00:00",
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},
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],
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{
"@id": "/measurement-sets/IGVFDS2259DWKL/",
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}
],
"release_timestamp": "2025-03-26T17:33:42.996564+00:00",
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{
"@id": "/in-vitro-systems/IGVFSM7625PGWV/",
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"Item"
],
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"buenrostro-bernstein:surya-H443 1_to_16, H456 17_to_32, H462 33_to_48, H511 49_to_56, H371 57_to_72, H514 73_to_88, H492A 89_to_96"
],
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],
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{
"@id": "/institutional-certificates/49b4e1cd-3aa4-454f-b58f-34a0d79fefee/",
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{
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],
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"term_name": "colon epithelial cell"
}
],
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"term_name": "colon"
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}
],
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"summary": "single-cell RNA sequencing assay (SHARE-seq)",
"uuid": "5cde05d5-00b2-4b17-880a-f6ba6de99e22"
}