Home

IGVFDS2510NXJE

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 181)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 449
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

21 items
Read Names
fastq
reads
I1
4025
Barcode index
22523KLT3
352 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4025
Read 1
22523KLT3
850 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1021
Read 1
22773CLT3
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
979
Read 1
22773CLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4025
Read 2
22523KLT3
410 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4097
Barcode index
22523KLT3
355 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1021
Read 2
22773CLT3
550 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
937
Barcode index
22773CLT3
476 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
937
Read 1
22773CLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1021
Barcode index
22773CLT3
483 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 181)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 434
Jason Buenrostro, Broad