{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS2491TQTU/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS2491TQTU",
"aliases": [
"igvf:corces_measurementSet_X053_G7_ATAC"
],
"assay_term": {
"@id": "/assay-terms/OBI_0002762/",
"assay_slims": [
"chromatin accessibility"
],
"status": "released",
"term_name": "single-nucleus ATAC-seq"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [aa1d3d22-9591-48ff-805a-7b96892820fd](/phenotypic-features/aa1d3d22-9591-48ff-805a-7b96892820fd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [9ea884c0-3c76-4fde-8e4c-ae0c38797da1](/phenotypic-features/9ea884c0-3c76-4fde-8e4c-ae0c38797da1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [a282f810-1f87-49f2-9fbf-1ebfbdfd0767](/phenotypic-features/a282f810-1f87-49f2-9fbf-1ebfbdfd0767/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [d94cc348-4571-4d2f-9e2c-1ae4e0c4c857](/phenotypic-features/d94cc348-4571-4d2f-9e2c-1ae4e0c4c857/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [a4aaf673-9174-4844-847b-c78dabed6ad5](/phenotypic-features/a4aaf673-9174-4844-847b-c78dabed6ad5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0180JQCL](/human-donors/IGVFDO0180JQCL/) has in progress subobject phenotypic feature [9d52ea4c-996d-4ee1-b1af-0bd95b6b700b](/phenotypic-features/9d52ea4c-996d-4ee1-b1af-0bd95b6b700b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0180JQCL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [793031fc-a40d-4951-9abf-09dcf84149cb](/phenotypic-features/793031fc-a40d-4951-9abf-09dcf84149cb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [95491ef2-b590-4c18-b81d-6c903ed626a4](/phenotypic-features/95491ef2-b590-4c18-b81d-6c903ed626a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [c9ecdf8e-7c0f-473e-a8be-77797167794c](/phenotypic-features/c9ecdf8e-7c0f-473e-a8be-77797167794c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [29048a47-9d7d-4ad1-bc30-b97bd2c5e4d7](/phenotypic-features/29048a47-9d7d-4ad1-bc30-b97bd2c5e4d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [721cdbe5-854d-428a-85b6-a444e6fe94c3](/phenotypic-features/721cdbe5-854d-428a-85b6-a444e6fe94c3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [6a8d3945-6600-4f71-bc2d-3aa7cd079713](/phenotypic-features/6a8d3945-6600-4f71-bc2d-3aa7cd079713/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [a0d65347-a21f-439b-bd5d-7232f0b1ee5e](/phenotypic-features/a0d65347-a21f-439b-bd5d-7232f0b1ee5e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [088a9bc3-3c47-43fb-a433-e98b083f05b0](/phenotypic-features/088a9bc3-3c47-43fb-a433-e98b083f05b0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c2483f59-ee42-47e9-855b-4121902f7e6e](/phenotypic-features/c2483f59-ee42-47e9-855b-4121902f7e6e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [bd6f3062-edeb-4a6b-8894-efd13d5f6d1a](/phenotypic-features/bd6f3062-edeb-4a6b-8894-efd13d5f6d1a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c474daa4-7513-404e-94d5-875f37a7c343](/phenotypic-features/c474daa4-7513-404e-94d5-875f37a7c343/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [688afed8-9edc-4232-aad4-2342093c1c09](/phenotypic-features/688afed8-9edc-4232-aad4-2342093c1c09/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8547HLIG](/human-donors/IGVFDO8547HLIG/) has in progress subobject phenotypic feature [edbac599-10a4-47e7-b223-454686c00404](/phenotypic-features/edbac599-10a4-47e7-b223-454686c00404/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8547HLIG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8547HLIG](/human-donors/IGVFDO8547HLIG/) has in progress subobject phenotypic feature [9afbbb32-aec3-415c-9550-be4507e4a552](/phenotypic-features/9afbbb32-aec3-415c-9550-be4507e4a552/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8547HLIG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8547HLIG](/human-donors/IGVFDO8547HLIG/) has in progress subobject phenotypic feature [d828635f-bd01-4b73-87de-10d233d81028](/phenotypic-features/d828635f-bd01-4b73-87de-10d233d81028/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8547HLIG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8547HLIG](/human-donors/IGVFDO8547HLIG/) has in progress subobject phenotypic feature [7ca1c142-3d4e-47fc-b5b8-0540d12993f8](/phenotypic-features/7ca1c142-3d4e-47fc-b5b8-0540d12993f8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8547HLIG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8547HLIG](/human-donors/IGVFDO8547HLIG/) has in progress subobject phenotypic feature [5bcd89ab-19d5-4404-be57-fb619f69d42a](/phenotypic-features/5bcd89ab-19d5-4404-be57-fb619f69d42a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8547HLIG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [58ee8a7b-2d6c-4319-a3ed-659f8f4bd2ad](/phenotypic-features/58ee8a7b-2d6c-4319-a3ed-659f8f4bd2ad/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [379eea64-a47e-4b72-9c55-562a0998a7be](/phenotypic-features/379eea64-a47e-4b72-9c55-562a0998a7be/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [73d02d35-b7a0-4250-9e20-8fe585c949ff](/phenotypic-features/73d02d35-b7a0-4250-9e20-8fe585c949ff/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [c7893559-54d2-4768-bfcc-e705d88c884d](/phenotypic-features/c7893559-54d2-4768-bfcc-e705d88c884d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [5c7de610-9d77-4450-b755-6296339a9a06](/phenotypic-features/5c7de610-9d77-4450-b755-6296339a9a06/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7109IWDJ](/human-donors/IGVFDO7109IWDJ/) has in progress subobject phenotypic feature [2d016559-41a5-4d0d-a206-e9b31fadb322](/phenotypic-features/2d016559-41a5-4d0d-a206-e9b31fadb322/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7109IWDJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [e469ed8e-b7b3-43ab-911f-20f855038419](/phenotypic-features/e469ed8e-b7b3-43ab-911f-20f855038419/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [b9914545-281c-4c85-add2-46440dec3556](/phenotypic-features/b9914545-281c-4c85-add2-46440dec3556/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [f002bd57-9c69-46f5-baeb-02ef36f0ae95](/phenotypic-features/f002bd57-9c69-46f5-baeb-02ef36f0ae95/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [457ba560-b6d1-4bea-b7fa-c043ca79ab7b](/phenotypic-features/457ba560-b6d1-4bea-b7fa-c043ca79ab7b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [99530794-7cba-40b4-a9d0-816f682a6751](/phenotypic-features/99530794-7cba-40b4-a9d0-816f682a6751/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [fff30f45-9273-47a0-847f-0619e27db9f1](/phenotypic-features/fff30f45-9273-47a0-847f-0619e27db9f1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3317CNEB](/human-donors/IGVFDO3317CNEB/) has in progress subobject phenotypic feature [11da601f-3cb7-4a5c-9997-e902d23f26c5](/phenotypic-features/11da601f-3cb7-4a5c-9997-e902d23f26c5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3317CNEB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3317CNEB](/human-donors/IGVFDO3317CNEB/) has in progress subobject phenotypic feature [8cf8784c-3fbb-459c-b286-621ffef9f967](/phenotypic-features/8cf8784c-3fbb-459c-b286-621ffef9f967/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3317CNEB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3317CNEB](/human-donors/IGVFDO3317CNEB/) has in progress subobject phenotypic feature [59e31a15-2cd7-4a9e-aa78-0c867a74f848](/phenotypic-features/59e31a15-2cd7-4a9e-aa78-0c867a74f848/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3317CNEB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3317CNEB](/human-donors/IGVFDO3317CNEB/) has in progress subobject phenotypic feature [5e9a12df-1f24-45f8-91cf-10b0f75d7ed7](/phenotypic-features/5e9a12df-1f24-45f8-91cf-10b0f75d7ed7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3317CNEB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [a0a18d18-51af-4fbc-9a8c-baa6f6b720cd](/phenotypic-features/a0a18d18-51af-4fbc-9a8c-baa6f6b720cd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [a393f393-5482-4671-b57c-fe8bfe6e8927](/phenotypic-features/a393f393-5482-4671-b57c-fe8bfe6e8927/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [2c783c74-fa89-4766-b218-3e0da350c6da](/phenotypic-features/2c783c74-fa89-4766-b218-3e0da350c6da/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [48e0e9c9-7759-4913-8219-2471979d793e](/phenotypic-features/48e0e9c9-7759-4913-8219-2471979d793e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [5206796d-df44-42d5-a495-92cfc4ef55c6](/phenotypic-features/5206796d-df44-42d5-a495-92cfc4ef55c6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9211DWXZ](/human-donors/IGVFDO9211DWXZ/) has in progress subobject phenotypic feature [c2f14d65-c7f8-46d1-8093-818906473518](/phenotypic-features/c2f14d65-c7f8-46d1-8093-818906473518/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9211DWXZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [b4caab48-6ad6-435d-b7d8-5fd75adcb6f9](/phenotypic-features/b4caab48-6ad6-435d-b7d8-5fd75adcb6f9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [bf330bc2-8a2a-4dc7-8aeb-f572a5fe9f1d](/phenotypic-features/bf330bc2-8a2a-4dc7-8aeb-f572a5fe9f1d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [ce38b3de-52ef-4922-90a9-554f69f41f83](/phenotypic-features/ce38b3de-52ef-4922-90a9-554f69f41f83/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [63252125-58f4-4e29-91f3-4103a1645797](/phenotypic-features/63252125-58f4-4e29-91f3-4103a1645797/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [cb846c22-2896-4683-83db-d4839ff90635](/phenotypic-features/cb846c22-2896-4683-83db-d4839ff90635/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3471KCPD](/human-donors/IGVFDO3471KCPD/) has in progress subobject phenotypic feature [7cef33e4-2883-4036-9171-f05b4ad41d82](/phenotypic-features/7cef33e4-2883-4036-9171-f05b4ad41d82/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3471KCPD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [16dd0641-17b5-4e28-8df8-c1557d69956e](/phenotypic-features/16dd0641-17b5-4e28-8df8-c1557d69956e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [0130d925-ca8e-441c-a725-9525a350da63](/phenotypic-features/0130d925-ca8e-441c-a725-9525a350da63/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [3ea18406-059b-4181-ad35-c617adcf8f07](/phenotypic-features/3ea18406-059b-4181-ad35-c617adcf8f07/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [f2944cd8-3e11-46e3-8dd8-a60165632a59](/phenotypic-features/f2944cd8-3e11-46e3-8dd8-a60165632a59/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS2491TQTU](/measurement-sets/IGVFDS2491TQTU/) has sequence file(s): [IGVFFI5552CGIO](/sequence-files/IGVFFI5552CGIO/), [IGVFFI0445YTDZ](/sequence-files/IGVFFI0445YTDZ/), [IGVFFI7869GEKI](/sequence-files/IGVFFI7869GEKI/), [IGVFFI1516PJCP](/sequence-files/IGVFFI1516PJCP/), [IGVFFI0122FEJJ](/sequence-files/IGVFFI0122FEJJ/), [IGVFFI1378WSHC](/sequence-files/IGVFFI1378WSHC/), [IGVFFI6455VATK](/sequence-files/IGVFFI6455VATK/), [IGVFFI5971OXPM](/sequence-files/IGVFFI5971OXPM/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS2491TQTU/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS2491TQTU](/measurement-sets/IGVFDS2491TQTU/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS2491TQTU/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS2491TQTU](/measurement-sets/IGVFDS2491TQTU/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS2491TQTU/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T19:49:23.954632+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO4825ZGIS/",
"accession": "IGVFDO4825ZGIS",
"aliases": [
"igvf:corces_donor_BANN2057"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3471KCPD/",
"accession": "IGVFDO3471KCPD",
"aliases": [
"igvf:corces_donor_BANN1647"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7109IWDJ/",
"accession": "IGVFDO7109IWDJ",
"aliases": [
"igvf:corces_donor_BANN2005"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0180JQCL/",
"accession": "IGVFDO0180JQCL",
"aliases": [
"igvf:corces_donor_BANN1344"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1997RFPJ/",
"accession": "IGVFDO1997RFPJ",
"aliases": [
"igvf:corces_donor_BANN1340"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0411QFOF/",
"accession": "IGVFDO0411QFOF",
"aliases": [
"igvf:corces_donor_BANN1750"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8547HLIG/",
"accession": "IGVFDO8547HLIG",
"aliases": [
"igvf:corces_donor_BANN1812"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3317CNEB/",
"accession": "IGVFDO3317CNEB",
"aliases": [
"igvf:corces_donor_BANN1902"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7387JZDV/",
"accession": "IGVFDO7387JZDV",
"aliases": [
"igvf:corces_donor_BANN1349"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9211DWXZ/",
"accession": "IGVFDO9211DWXZ",
"aliases": [
"igvf:corces_donor_BANN1352"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI5552CGIO/",
"accession": "IGVFFI5552CGIO",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X053_G7_P071_L006_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:31:01.876162+00:00",
"file_format": "fastq",
"file_size": 10197220369,
"href": "/sequence-files/IGVFFI5552CGIO/@@download/IGVFFI5552CGIO.fastq.gz",
"md5sum": "4ded6842e0fb387ff705a65d0d3e3fed",
"s3_uri": "s3://igvf-files/2025/03/20/80dc132e-849a-4be2-a39d-f33946dc7de9/IGVFFI5552CGIO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X053_G7_L007_P071_S51_L006_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0445YTDZ/",
"accession": "IGVFFI0445YTDZ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X053_G7_P071_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:31:08.731961+00:00",
"file_format": "fastq",
"file_size": 1063466396,
"href": "/sequence-files/IGVFFI0445YTDZ/@@download/IGVFFI0445YTDZ.fastq.gz",
"md5sum": "320e1c599838febae90615bd3274d2a0",
"s3_uri": "s3://igvf-files/2025/03/20/5998ab70-468e-4983-b17c-c45d6c9d47f3/IGVFFI0445YTDZ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X053_G7_L007_P071_S51_L007_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7869GEKI/",
"accession": "IGVFFI7869GEKI",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X053_G7_P071_L006_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:31:03.832953+00:00",
"file_format": "fastq",
"file_size": 2490517276,
"href": "/sequence-files/IGVFFI7869GEKI/@@download/IGVFFI7869GEKI.fastq.gz",
"md5sum": "432b2df4a87e29f14f61a27ee57c29a9",
"s3_uri": "s3://igvf-files/2025/03/20/7572df26-ac19-4bd7-8cfd-2562c63ed6df/IGVFFI7869GEKI.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X053_G7_L007_P071_S51_L006_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1516PJCP/",
"accession": "IGVFFI1516PJCP",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X053_G7_P071_L007_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:31:15.941145+00:00",
"file_format": "fastq",
"file_size": 9920811368,
"href": "/sequence-files/IGVFFI1516PJCP/@@download/IGVFFI1516PJCP.fastq.gz",
"md5sum": "9b92a94a1fb7e7531385197e55d2aafd",
"s3_uri": "s3://igvf-files/2025/03/20/7cc287b7-b2bc-4591-98ea-207baca35e88/IGVFFI1516PJCP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X053_G7_L007_P071_S51_L007_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0122FEJJ/",
"accession": "IGVFFI0122FEJJ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X053_G7_P071_L006_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:30:59.327404+00:00",
"file_format": "fastq",
"file_size": 1061149597,
"href": "/sequence-files/IGVFFI0122FEJJ/@@download/IGVFFI0122FEJJ.fastq.gz",
"md5sum": "65a890e86700d9cedae41408e398908f",
"s3_uri": "s3://igvf-files/2025/03/20/90f987d8-83aa-4db7-871c-2662588f8dc0/IGVFFI0122FEJJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X053_G7_L007_P071_S51_L006_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1378WSHC/",
"accession": "IGVFFI1378WSHC",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X053_G7_P071_L006_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:31:06.206780+00:00",
"file_format": "fastq",
"file_size": 9848166529,
"href": "/sequence-files/IGVFFI1378WSHC/@@download/IGVFFI1378WSHC.fastq.gz",
"md5sum": "2ff3423d3e730fa7bdefb39ee90126b1",
"s3_uri": "s3://igvf-files/2025/03/20/11d2b63c-dbc3-4123-9a51-ae9af7bd9b0c/IGVFFI1378WSHC.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X053_G7_L007_P071_S51_L006_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6455VATK/",
"accession": "IGVFFI6455VATK",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X053_G7_P071_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:31:10.518350+00:00",
"file_format": "fastq",
"file_size": 10213458789,
"href": "/sequence-files/IGVFFI6455VATK/@@download/IGVFFI6455VATK.fastq.gz",
"md5sum": "ec032a37361136ae4ddac1871d7188fd",
"s3_uri": "s3://igvf-files/2025/03/20/dbc8b265-39b5-498c-ad0e-ee8f09a3cb41/IGVFFI6455VATK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X053_G7_L007_P071_S51_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5971OXPM/",
"accession": "IGVFFI5971OXPM",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X053_G7_P071_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T23:31:13.286970+00:00",
"file_format": "fastq",
"file_size": 2504944164,
"href": "/sequence-files/IGVFFI5971OXPM/@@download/IGVFFI5971OXPM.fastq.gz",
"md5sum": "064c945317694ed9e68566bb70064d80",
"s3_uri": "s3://igvf-files/2025/03/20/6cf74daf-7c66-468e-ae69-7279de139a92/IGVFFI5971OXPM.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X053_G7_L007_P071_S51_L007_R2_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI7587TJLC/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS7588UXOK/",
"accession": "IGVFDS7588UXOK",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM2635PZMY/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM2635PZMY",
"aliases": [
"igvf:corces_multiplexedSample_X053_G7"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T23:30:59.327404+00:00",
"summary": "single-nucleus ATAC-seq (10x multiome)",
"uuid": "0834e572-fbd3-48cf-8654-87b15f6fa217"
}