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IGVFDS2472COJU

released
File Set Type
experimental data
Summary
CRISPR HiCAR integrating a guide (sgRNA) library targeting accessible genome regions in a genomic locus
Assay Term
Hi-C assay
Sample Summaries
  • GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens transfected with a guide library
Construct Library Sets
  • IGVFDS2023ZEFC guide (sgRNA) library targeting accessible genome regions in a genomic locus
Protocols
Aliases
charles-gersbach:measurement-set-crispri-region3-ipsc-cm-targeted-hicar-rep1

Sequencing Results (Illumina)

2 items
fastq
reads
R1
3
2.1 GB
Charles Gersbach, Duke
validated
fastq
reads
R2
3
2.4 GB
Charles Gersbach, Duke
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens transfected with a guide library

Donors

1 item
Accession
Aliases
Sex
Taxa
  • charles-gersbach:human-donor-WTC11
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
HiCAR: contact matrix
  • charles-gersbach:analysis-set-crispri-region3-ipsc-cm-targeted-hicar-rep1-cool
Charles Gersbach, Duke

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke