Home

IGVFDS2384YMIN

released
File Set Type
experimental data
Summary
Parse SPLiT-seq
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 254 more samples
Protocols
Aliases
ali-mortazavi:007_13A_illumina
Attribution
Ali Mortazavi, UCI

Sequencing Results (Illumina)

2 items
Read Names
fastq
reads
R2
1
Read 2
AAC3V7HHV
19 GB
Ali Mortazavi, UCI
validated
fastq
reads
R1
1
Read 1
AAC3V7HHV
32 GB
Ali Mortazavi, UCI
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 254 more samples

Donors

65 items
Aliases
  • ali-mortazavi:018_B6J_10F
female
Mus musculus
  • ali-mortazavi:041_129S1J_10M
male
Mus musculus
  • ali-mortazavi:030_AJ_10F
female
Mus musculus
  • ali-mortazavi:052_NZOJ_10F
female
Mus musculus
  • ali-mortazavi:057_WSBJ_10M
male
Mus musculus
  • ali-mortazavi:080_PWKJ_10F
female
Mus musculus
  • ali-mortazavi:069_NODJ_10M
male
Mus musculus
  • ali-mortazavi:058_WSBJ_10F
female
Mus musculus
  • ali-mortazavi:035_AJ_10M
male
Mus musculus
  • ali-mortazavi:088_CASTJ_10F
female
Mus musculus

Assay Details

Sequencing Library Types
exome capture

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
Parse SPLiT-seq: sparse gene count matrix
  • ali-mortazavi:igvf_007_Subpool_EX_total+core
Ali Mortazavi, UCI