IGVFDS2328NLDU

preview

This object is in preview status. Metadata is subject to change until this object is released.

File Set Type

experimental data

Summary

single-nucleus RNA sequencing assay (10x multiome)

Assay Term

single-nucleus RNA sequencing assay

Sample Summaries

multiplexed sample: Homo sapiens (male, 87 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy; ... and 10 more samples

Protocols

https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn

Aliases

igvf:corces_measurementSet_X005_G6_RNA

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Results (Illumina)

2 items

Read Names

IGVFFI2423XPPN

fastq

reads

Illumina NovaSeq 6000

H5TLFDSX5

9.5 GB

Ryan Corces, Gladstone Institute UCSF

validated

IGVFFI8088EKFK

fastq

reads

Illumina NovaSeq 6000

H5TLFDSX5

11 GB

Ryan Corces, Gladstone Institute UCSF

validated

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Associated Construct Library Sets

Summary

IGVFSM6427JBTA

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 87 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with cerebral amyloid angiopathy; ... and 10 more samples