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IGVFDS2260NIWP

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 184)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 472
Submitter Comment
Does not have corresponding scRNA seq MeasurementSet due to failed QC
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

30 items
Read Names
fastq
reads
I1
828
Barcode index
22773CLT3
909 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
810
Barcode index
22773CLT3
918 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8590
Read 1
22LMVNLT4
807 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8974
Barcode index
22LMVNLT4
473 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9166
Read 2
22LMVNLT4
672 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8878
Barcode index
22LMVNLT4
497 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9070
Read 2
22LMVNLT4
723 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9070
Read 1
22LMVNLT4
801 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8878
Read 1
22LMVNLT4
821 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
828
Read 2
22773CLT3
958 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 184)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens