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IGVFDS2234GUSK

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 199)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 551
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

30 items
Read Names
fastq
reads
R1
9177
Read 1
22LMVNLT4
746 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4307
Barcode index
H75F7DSX5
1.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8793
Barcode index
22LMVNLT4
460 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8889
Read 1
22LMVNLT4
793 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8505
Barcode index
22LMVNLT4
480 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9177
Barcode index
22LMVNLT4
439 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9081
Barcode index
22LMVNLT4
457 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4252
Read 2
22523KLT3
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8985
Read 1
22LMVNLT4
755 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8889
Barcode index
22LMVNLT4
461 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 199)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 378
Jason Buenrostro, Broad