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INDEXED
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MeasurementSet
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IGVFDS2160BCQF
IGVFDS2160BCQF
released
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Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 5 days
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C39_day5
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0300MREM
fastq
reads
R2
2
Illumina NovaSeq X
3
2.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI0574KMLM
fastq
reads
R2
2
Illumina NovaSeq X
5
2.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI0963XPFG
fastq
reads
R2
2
Illumina NovaSeq X
2
2.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI0989MLMY
fastq
reads
R2
2
Illumina NovaSeq X
4
2.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI1078XBJO
fastq
reads
R1
1
Illumina NovaSeq X
4
2.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI1259CRGX
fastq
reads
R2
2
Illumina NovaSeq X
1
2.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI2180YWVV
fastq
reads
R1
1
Illumina NovaSeq X
5
2.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI2843AERA
fastq
reads
R1
1
Illumina NovaSeq X
3
2.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI3154CXDA
fastq
reads
R1
1
Illumina NovaSeq X
7
1.9 GB
Chongyuan Luo, UCLA
validated
IGVFFI4742BPRN
fastq
reads
R1
1
Illumina NovaSeq X
6
2.0 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM4751ZQCG
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 5 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO4068JJIT
chongyuan-luo:C39
unspecified
Homo sapiens