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IGVFDS2063ABVV

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 199)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 549
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

30 items
Read Names
fastq
reads
R2
4305
Read 2
H75F7DSX5
2.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9079
Read 2
22LMVNLT4
855 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8503
Read 1
22LMVNLT4
936 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4250
Barcode index
22523KLT3
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9175
Read 2
22LMVNLT4
812 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4305
Barcode index
H75F7DSX5
2.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8695
Read 2
22LMVNLT4
882 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8791
Barcode index
22LMVNLT4
521 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9175
Read 1
22LMVNLT4
847 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8983
Barcode index
22LMVNLT4
501 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 199)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 376
Jason Buenrostro, Broad