{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS1897GFNY/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS1897GFNY",
"aliases": [
"igvf:corces_measurementSet_X050_G4_ATAC"
],
"assay_term": {
"@id": "/assay-terms/OBI_0002762/",
"assay_slims": [
"chromatin accessibility"
],
"status": "released",
"term_name": "single-nucleus ATAC-seq"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [9bde93a0-8a45-4af9-a3d3-d227b912174e](/phenotypic-features/9bde93a0-8a45-4af9-a3d3-d227b912174e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [c5e31c41-b085-41c2-9f97-8b16d3d79237](/phenotypic-features/c5e31c41-b085-41c2-9f97-8b16d3d79237/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [76d1545b-cd78-4f5a-a2ad-ee965a0866c1](/phenotypic-features/76d1545b-cd78-4f5a-a2ad-ee965a0866c1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [36fe54cd-7d3e-4900-b3c1-c60664f4a3d8](/phenotypic-features/36fe54cd-7d3e-4900-b3c1-c60664f4a3d8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [2695d331-284d-48de-b21c-48f1d4fbe99c](/phenotypic-features/2695d331-284d-48de-b21c-48f1d4fbe99c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [d04757f1-97fb-4880-b773-6e2de0dae7fb](/phenotypic-features/d04757f1-97fb-4880-b773-6e2de0dae7fb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [8790c6f7-88f2-4fb1-ac9c-edba4df8ee68](/phenotypic-features/8790c6f7-88f2-4fb1-ac9c-edba4df8ee68/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [93b9663b-8d12-4847-b578-798d6d08a5d7](/phenotypic-features/93b9663b-8d12-4847-b578-798d6d08a5d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [74a7866d-ae30-4c3c-87c8-e6ee465cbb92](/phenotypic-features/74a7866d-ae30-4c3c-87c8-e6ee465cbb92/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [b108288d-1ef0-4234-9b6b-10c5011f2d3e](/phenotypic-features/b108288d-1ef0-4234-9b6b-10c5011f2d3e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [5cb28322-2d6b-409f-950e-f6b78c71b3c5](/phenotypic-features/5cb28322-2d6b-409f-950e-f6b78c71b3c5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [fc0c92f4-96a4-4665-bf46-bf345a1cb081](/phenotypic-features/fc0c92f4-96a4-4665-bf46-bf345a1cb081/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [6ea3add1-256e-497d-b2ed-6440e1b9c61d](/phenotypic-features/6ea3add1-256e-497d-b2ed-6440e1b9c61d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [e6ce9dcf-358f-4bfa-88fe-80aa93093ef6](/phenotypic-features/e6ce9dcf-358f-4bfa-88fe-80aa93093ef6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [d78f4b48-7bfb-40b4-a5a7-4e2207d7a43b](/phenotypic-features/d78f4b48-7bfb-40b4-a5a7-4e2207d7a43b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [f869ce97-cce9-4af8-8c36-07e368584a17](/phenotypic-features/f869ce97-cce9-4af8-8c36-07e368584a17/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [2d965f3b-4869-4a71-96f5-9b35c25cd94a](/phenotypic-features/2d965f3b-4869-4a71-96f5-9b35c25cd94a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8a8a3203-c182-4206-8786-d22c604017ca](/phenotypic-features/8a8a3203-c182-4206-8786-d22c604017ca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [a331f60c-ad57-4e67-abef-71ce7f5c533b](/phenotypic-features/a331f60c-ad57-4e67-abef-71ce7f5c533b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8d33ce55-7875-4008-8ea0-117b359f3bde](/phenotypic-features/8d33ce55-7875-4008-8ea0-117b359f3bde/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [5aff39eb-64aa-4ab2-b6ac-9352e4e5974d](/phenotypic-features/5aff39eb-64aa-4ab2-b6ac-9352e4e5974d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [e5d45886-2d5a-4f54-9595-ddecf9ee0dc3](/phenotypic-features/e5d45886-2d5a-4f54-9595-ddecf9ee0dc3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [0fd0acf9-94ba-4952-9984-7d1e562d121a](/phenotypic-features/0fd0acf9-94ba-4952-9984-7d1e562d121a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [be5d84fc-8dc2-496a-8ecf-440a2092a07c](/phenotypic-features/be5d84fc-8dc2-496a-8ecf-440a2092a07c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [67b114cf-7764-4391-8fd6-ac46ac9bc7a4](/phenotypic-features/67b114cf-7764-4391-8fd6-ac46ac9bc7a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [2215de1b-9e0d-47cd-a69d-7f4faf6b0976](/phenotypic-features/2215de1b-9e0d-47cd-a69d-7f4faf6b0976/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [fb128197-8fc4-4ae2-90ee-244353c5c115](/phenotypic-features/fb128197-8fc4-4ae2-90ee-244353c5c115/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [9987347f-6f4d-4d82-88c9-0c4c4317a278](/phenotypic-features/9987347f-6f4d-4d82-88c9-0c4c4317a278/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [45dc979b-555f-4b01-8d0f-a743d2314876](/phenotypic-features/45dc979b-555f-4b01-8d0f-a743d2314876/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [973e8365-f16f-4cd4-b8d8-3810cfb6de08](/phenotypic-features/973e8365-f16f-4cd4-b8d8-3810cfb6de08/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [3722891d-0d84-4ede-8520-3db83e7a6b16](/phenotypic-features/3722891d-0d84-4ede-8520-3db83e7a6b16/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [633b00ad-b194-4a5e-996f-0e6e7d188a4b](/phenotypic-features/633b00ad-b194-4a5e-996f-0e6e7d188a4b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [c0ce9b04-e7ed-4b93-a2eb-beb1600b8a07](/phenotypic-features/c0ce9b04-e7ed-4b93-a2eb-beb1600b8a07/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [f57b6265-94b7-4979-be4c-73ef23b5faba](/phenotypic-features/f57b6265-94b7-4979-be4c-73ef23b5faba/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [0165d0f4-b610-4164-9bc3-08dc74af02b3](/phenotypic-features/0165d0f4-b610-4164-9bc3-08dc74af02b3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [3a8f2048-d423-49dc-872f-a2d52489895c](/phenotypic-features/3a8f2048-d423-49dc-872f-a2d52489895c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [87d488ba-ef89-494c-8024-bee2b8535732](/phenotypic-features/87d488ba-ef89-494c-8024-bee2b8535732/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [633cb08c-78bd-4268-b5d8-b893a02d26f8](/phenotypic-features/633cb08c-78bd-4268-b5d8-b893a02d26f8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [5d86271f-e200-458e-b626-d45775c1f778](/phenotypic-features/5d86271f-e200-458e-b626-d45775c1f778/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [29048a47-9d7d-4ad1-bc30-b97bd2c5e4d7](/phenotypic-features/29048a47-9d7d-4ad1-bc30-b97bd2c5e4d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [95491ef2-b590-4c18-b81d-6c903ed626a4](/phenotypic-features/95491ef2-b590-4c18-b81d-6c903ed626a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [721cdbe5-854d-428a-85b6-a444e6fe94c3](/phenotypic-features/721cdbe5-854d-428a-85b6-a444e6fe94c3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [c9ecdf8e-7c0f-473e-a8be-77797167794c](/phenotypic-features/c9ecdf8e-7c0f-473e-a8be-77797167794c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [793031fc-a40d-4951-9abf-09dcf84149cb](/phenotypic-features/793031fc-a40d-4951-9abf-09dcf84149cb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [6a8d3945-6600-4f71-bc2d-3aa7cd079713](/phenotypic-features/6a8d3945-6600-4f71-bc2d-3aa7cd079713/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [90b0bf16-a18e-43cb-bb98-bf4669038218](/phenotypic-features/90b0bf16-a18e-43cb-bb98-bf4669038218/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [46e3579d-2d7c-4261-9097-e79ce55659d7](/phenotypic-features/46e3579d-2d7c-4261-9097-e79ce55659d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [3b3c1422-094a-4628-8016-b68101826498](/phenotypic-features/3b3c1422-094a-4628-8016-b68101826498/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [e714882d-9950-4b85-ac94-94d4b4819195](/phenotypic-features/e714882d-9950-4b85-ac94-94d4b4819195/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [68f44c19-e788-4ddb-b0f1-648990236cdb](/phenotypic-features/68f44c19-e788-4ddb-b0f1-648990236cdb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [688afed8-9edc-4232-aad4-2342093c1c09](/phenotypic-features/688afed8-9edc-4232-aad4-2342093c1c09/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [088a9bc3-3c47-43fb-a433-e98b083f05b0](/phenotypic-features/088a9bc3-3c47-43fb-a433-e98b083f05b0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c474daa4-7513-404e-94d5-875f37a7c343](/phenotypic-features/c474daa4-7513-404e-94d5-875f37a7c343/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [a0d65347-a21f-439b-bd5d-7232f0b1ee5e](/phenotypic-features/a0d65347-a21f-439b-bd5d-7232f0b1ee5e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c2483f59-ee42-47e9-855b-4121902f7e6e](/phenotypic-features/c2483f59-ee42-47e9-855b-4121902f7e6e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [bd6f3062-edeb-4a6b-8894-efd13d5f6d1a](/phenotypic-features/bd6f3062-edeb-4a6b-8894-efd13d5f6d1a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS1897GFNY](/measurement-sets/IGVFDS1897GFNY/) has sequence file(s): [IGVFFI0047BPAV](/sequence-files/IGVFFI0047BPAV/), [IGVFFI4496WAUK](/sequence-files/IGVFFI4496WAUK/), [IGVFFI1699SDDV](/sequence-files/IGVFFI1699SDDV/), [IGVFFI1471XWLQ](/sequence-files/IGVFFI1471XWLQ/), [IGVFFI1861NKAO](/sequence-files/IGVFFI1861NKAO/), [IGVFFI7892EXFK](/sequence-files/IGVFFI7892EXFK/), [IGVFFI2408NPMQ](/sequence-files/IGVFFI2408NPMQ/), [IGVFFI2150MFUE](/sequence-files/IGVFFI2150MFUE/), [IGVFFI6162HYAN](/sequence-files/IGVFFI6162HYAN/), [IGVFFI4911OSQP](/sequence-files/IGVFFI4911OSQP/), [IGVFFI3838UVZP](/sequence-files/IGVFFI3838UVZP/), [IGVFFI6291IYQZ](/sequence-files/IGVFFI6291IYQZ/), [IGVFFI8443MCNU](/sequence-files/IGVFFI8443MCNU/), [IGVFFI7175QCPF](/sequence-files/IGVFFI7175QCPF/), [IGVFFI4412XPCQ](/sequence-files/IGVFFI4412XPCQ/), [IGVFFI2979EGYS](/sequence-files/IGVFFI2979EGYS/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS1897GFNY/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS1897GFNY](/measurement-sets/IGVFDS1897GFNY/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS1897GFNY/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T19:48:28.936898+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO0967LMSM/",
"accession": "IGVFDO0967LMSM",
"aliases": [
"igvf:corces_donor_BANN1973"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7227BIXW/",
"accession": "IGVFDO7227BIXW",
"aliases": [
"igvf:corces_donor_BANN1614"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5205IAEO/",
"accession": "IGVFDO5205IAEO",
"aliases": [
"igvf:corces_donor_BANN1632"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6380POHE/",
"accession": "IGVFDO6380POHE",
"aliases": [
"igvf:corces_donor_BANN0124"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7186XJLL/",
"accession": "IGVFDO7186XJLL",
"aliases": [
"igvf:corces_donor_BANN1639"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7387JZDV/",
"accession": "IGVFDO7387JZDV",
"aliases": [
"igvf:corces_donor_BANN1349"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2559GIIZ/",
"accession": "IGVFDO2559GIIZ",
"aliases": [
"igvf:corces_donor_BANN2103"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6000JDZW/",
"accession": "IGVFDO6000JDZW",
"aliases": [
"igvf:corces_donor_BANN1858"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9236YUAT/",
"accession": "IGVFDO9236YUAT",
"aliases": [
"igvf:corces_donor_BANN0227"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4825ZGIS/",
"accession": "IGVFDO4825ZGIS",
"aliases": [
"igvf:corces_donor_BANN2057"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI0047BPAV/",
"accession": "IGVFFI0047BPAV",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L008_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:02:19.375336+00:00",
"file_format": "fastq",
"file_size": 1887818836,
"href": "/sequence-files/IGVFFI0047BPAV/@@download/IGVFFI0047BPAV.fastq.gz",
"md5sum": "81e9755bb1267d2bf5d467ba8ca24461",
"s3_uri": "s3://igvf-files/2025/03/20/232ced8d-24f2-4833-bf7b-95032fd613e6/IGVFFI0047BPAV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L008_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4496WAUK/",
"accession": "IGVFFI4496WAUK",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L005_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:01:47.171115+00:00",
"file_format": "fastq",
"file_size": 424522037,
"href": "/sequence-files/IGVFFI4496WAUK/@@download/IGVFFI4496WAUK.fastq.gz",
"md5sum": "bd7130cac51b0879dfdc566ada7869de",
"s3_uri": "s3://igvf-files/2025/03/20/2b1aa89e-113f-472c-8049-fa9df5b1c872/IGVFFI4496WAUK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L005_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1699SDDV/",
"accession": "IGVFFI1699SDDV",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L006_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:01:57.752279+00:00",
"file_format": "fastq",
"file_size": 1793478711,
"href": "/sequence-files/IGVFFI1699SDDV/@@download/IGVFFI1699SDDV.fastq.gz",
"md5sum": "2688bdd3972c9a19d80d242da062b7a0",
"s3_uri": "s3://igvf-files/2025/03/20/4d4d679b-c9dc-4d39-a98f-ebf92d96da8b/IGVFFI1699SDDV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L006_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1471XWLQ/",
"accession": "IGVFFI1471XWLQ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:02:06.557729+00:00",
"file_format": "fastq",
"file_size": 1857707754,
"href": "/sequence-files/IGVFFI1471XWLQ/@@download/IGVFFI1471XWLQ.fastq.gz",
"md5sum": "bd970309a60055337149086dc4d1b7de",
"s3_uri": "s3://igvf-files/2025/03/20/d726b5c6-6cee-46f6-a73a-abe119a953dc/IGVFFI1471XWLQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1861NKAO/",
"accession": "IGVFFI1861NKAO",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:02:08.601063+00:00",
"file_format": "fastq",
"file_size": 1073059492,
"href": "/sequence-files/IGVFFI1861NKAO/@@download/IGVFFI1861NKAO.fastq.gz",
"md5sum": "b6f794364a02971c8398268206e76e38",
"s3_uri": "s3://igvf-files/2025/03/20/04f505c1-23e9-4cb9-96c4-a1efdb506f2a/IGVFFI1861NKAO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L007_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7892EXFK/",
"accession": "IGVFFI7892EXFK",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L007_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:02:10.744156+00:00",
"file_format": "fastq",
"file_size": 1864157949,
"href": "/sequence-files/IGVFFI7892EXFK/@@download/IGVFFI7892EXFK.fastq.gz",
"md5sum": "c3c8c680baad40cc9a76698463f1de2b",
"s3_uri": "s3://igvf-files/2025/03/20/bbabc378-a8a9-415d-8e34-70bc3978cc1e/IGVFFI7892EXFK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L007_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2408NPMQ/",
"accession": "IGVFFI2408NPMQ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L008_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:02:12.848243+00:00",
"file_format": "fastq",
"file_size": 448789208,
"href": "/sequence-files/IGVFFI2408NPMQ/@@download/IGVFFI2408NPMQ.fastq.gz",
"md5sum": "53e60e400caab0d00cbc17a393bfde80",
"s3_uri": "s3://igvf-files/2025/03/20/94ee3f6c-7422-4d25-9ee4-686e292d1c8d/IGVFFI2408NPMQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L008_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2150MFUE/",
"accession": "IGVFFI2150MFUE",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L005_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:01:51.665128+00:00",
"file_format": "fastq",
"file_size": 1010249557,
"href": "/sequence-files/IGVFFI2150MFUE/@@download/IGVFFI2150MFUE.fastq.gz",
"md5sum": "f38484c24d3a685bf0b42bb4163d89ca",
"s3_uri": "s3://igvf-files/2025/03/20/a8b4ebc2-d2b1-45ca-8fc2-95277c1818b5/IGVFFI2150MFUE.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L005_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6162HYAN/",
"accession": "IGVFFI6162HYAN",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L006_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:02:02.207449+00:00",
"file_format": "fastq",
"file_size": 1792663224,
"href": "/sequence-files/IGVFFI6162HYAN/@@download/IGVFFI6162HYAN.fastq.gz",
"md5sum": "79fedef8ba4fa24ae0296f1d8f0596ac",
"s3_uri": "s3://igvf-files/2025/03/20/086afe74-1c5c-47d5-a7d6-7468388c7985/IGVFFI6162HYAN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L006_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4911OSQP/",
"accession": "IGVFFI4911OSQP",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L005_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:01:54.067060+00:00",
"file_format": "fastq",
"file_size": 1762097950,
"href": "/sequence-files/IGVFFI4911OSQP/@@download/IGVFFI4911OSQP.fastq.gz",
"md5sum": "5b5a9149db2658dd315373f2d466c2a7",
"s3_uri": "s3://igvf-files/2025/03/20/a6c5b8e3-8af6-4071-8b49-76653d3ed7c0/IGVFFI4911OSQP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L005_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3838UVZP/",
"accession": "IGVFFI3838UVZP",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L006_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:01:59.791891+00:00",
"file_format": "fastq",
"file_size": 1030658796,
"href": "/sequence-files/IGVFFI3838UVZP/@@download/IGVFFI3838UVZP.fastq.gz",
"md5sum": "b3f7947d57b6bacb7e5a76e4bfeea9ae",
"s3_uri": "s3://igvf-files/2025/03/20/c84829b4-fab4-4756-8933-d32d64841d73/IGVFFI3838UVZP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L006_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6291IYQZ/",
"accession": "IGVFFI6291IYQZ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:02:04.555223+00:00",
"file_format": "fastq",
"file_size": 445273941,
"href": "/sequence-files/IGVFFI6291IYQZ/@@download/IGVFFI6291IYQZ.fastq.gz",
"md5sum": "6d50138fe079e1219430f96340be7af3",
"s3_uri": "s3://igvf-files/2025/03/20/ef875a39-6df3-403a-8f57-9595f6f4297a/IGVFFI6291IYQZ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L007_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8443MCNU/",
"accession": "IGVFFI8443MCNU",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L008_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:02:14.919220+00:00",
"file_format": "fastq",
"file_size": 1871544062,
"href": "/sequence-files/IGVFFI8443MCNU/@@download/IGVFFI8443MCNU.fastq.gz",
"md5sum": "13ae85bf57ebd9028154b172142fd41f",
"s3_uri": "s3://igvf-files/2025/03/20/3aab5d18-f0e0-43bc-bd93-b0e1461b3eb4/IGVFFI8443MCNU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L008_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7175QCPF/",
"accession": "IGVFFI7175QCPF",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L006_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:01:55.776258+00:00",
"file_format": "fastq",
"file_size": 431215033,
"href": "/sequence-files/IGVFFI7175QCPF/@@download/IGVFFI7175QCPF.fastq.gz",
"md5sum": "e713591342d1c470b247de1eed6d0cf5",
"s3_uri": "s3://igvf-files/2025/03/20/3a6166ca-c3ae-4732-a3d5-7f6b59cc76be/IGVFFI7175QCPF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L006_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4412XPCQ/",
"accession": "IGVFFI4412XPCQ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L005_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:01:49.199293+00:00",
"file_format": "fastq",
"file_size": 1761798409,
"href": "/sequence-files/IGVFFI4412XPCQ/@@download/IGVFFI4412XPCQ.fastq.gz",
"md5sum": "dddffff94b872e8a577daadcd8d151ee",
"s3_uri": "s3://igvf-files/2025/03/20/1a235703-cdeb-4cf3-8a90-355d5723194f/IGVFFI4412XPCQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L005_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2979EGYS/",
"accession": "IGVFFI2979EGYS",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X050_G4_P065_L008_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:02:16.806259+00:00",
"file_format": "fastq",
"file_size": 1082480527,
"href": "/sequence-files/IGVFFI2979EGYS/@@download/IGVFFI2979EGYS.fastq.gz",
"md5sum": "7b36cf2fa3f09332674f1c776c641c7e",
"s3_uri": "s3://igvf-files/2025/03/20/649d52b0-7fba-449c-a135-fafec6478332/IGVFFI2979EGYS.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X050_G4_L004_P065_S34_L008_R2_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI7587TJLC/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS5558GPUT/",
"accession": "IGVFDS5558GPUT",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM7568QAEB/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM7568QAEB",
"aliases": [
"igvf:corces_multiplexedSample_X050_G4"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
},
{
"@id": "/phenotype-terms/MONDO_0004975/",
"status": "released",
"term_name": "Alzheimer disease"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; ... and 8 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T22:01:47.171115+00:00",
"summary": "single-nucleus ATAC-seq (10x multiome)",
"uuid": "66317fd1-57a8-492b-bced-7a3a48df4940"
}