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IGVFDS1872UZFL

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 182)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 459
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

30 items
Read Names
fastq
reads
R1
4254
Read 1
22523KLT3
2.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8673
Read 2
22LMVNLT4
778 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9153
Read 1
22LMVNLT4
753 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4308
Read 1
H75F7DSX5
5.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4308
Barcode index
H75F7DSX5
1.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8961
Read 2
22LMVNLT4
730 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8865
Read 1
22LMVNLT4
802 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8481
Barcode index
22LMVNLT4
478 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4254
Read 2
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8577
Read 1
22LMVNLT4
794 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 182)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 372
Jason Buenrostro, Broad