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IGVFDS1483XTRT

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 605)
Protocols
Aliases
buenrostro-bernstein:scRNA Lib 845
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
R2
8416
Read 2, Barcode index
22V3MJLT3
5.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8406
Read 2, Barcode index
22V3MJLT3
5.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8426
Read 2, Barcode index
22V3MJLT3
5.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8426
Read 1
22V3MJLT3
3.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8416
Read 1
22V3MJLT3
3.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8406
Read 1
22V3MJLT3
3.4 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 605)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • ali-mortazavi:773_CASTJ_10M
  • buenrostro-bernstein:Donor 2071
male
Mus musculus

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:scATAC Lib 1781
Jason Buenrostro, Broad