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IGVFDS1448IDZP

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This object is in preview status. Metadata is subject to change until this object is released.
File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (male, 89 years) substantia nigra tissue; Homo sapiens (female, 84 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples
Protocols
Aliases
igvf:corces_measurementSet_X035_G7_RNA
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R2
1
Read 2
H2WFTDSX7
4
12 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I1
1
H2WFTDSX7
4
1.5 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R1
1
Read 1
H2WFTDSX7
4
15 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
H2WFTDSX7
4
1.6 GB
Ryan Corces, Gladstone Institute UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 89 years) substantia nigra tissue; Homo sapiens (female, 84 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples

Donors

12 items
Aliases
  • igvf:corces_donor_BANN1554
male
Homo sapiens
  • igvf:corces_donor_BANN1584
male
Homo sapiens
  • igvf:corces_donor_BANN1037
female
Homo sapiens
  • igvf:corces_donor_BANN0413
male
Homo sapiens
  • igvf:corces_donor_BANN0526
male
Homo sapiens
  • igvf:corces_donor_BANN1719
female
Homo sapiens
  • igvf:corces_donor_BANN1839
female
Homo sapiens
  • igvf:corces_donor_BANN1858
male
Homo sapiens
  • igvf:corces_donor_BANN0517
female
Homo sapiens
  • igvf:corces_donor_BANN0341
male
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_X035_G7_ATAC
Ryan Corces, Gladstone Institute UCSF