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IGVFDS1446ZOWN

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 167)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 369
Submitter Comment
Does not have corresponding scRNA seq MeasurementSet due to failed QC
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

30 items
Read Names
fastq
reads
I1
821
Barcode index
22773CLT3
1.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8817
Barcode index
22LMVNLT4
424 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9105
Read 1
22LMVNLT4
693 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8529
Read 2
22LMVNLT4
710 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8529
Read 1
22LMVNLT4
736 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8625
Read 1
22LMVNLT4
743 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
803
Read 2
22773CLT3
1.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8433
Read 2
22LMVNLT4
740 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9009
Barcode index
22LMVNLT4
418 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9009
Read 2
22LMVNLT4
701 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 167)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens