{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS1426FMMN/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS1426FMMN",
"aliases": [
"igvf:corces_measurementSet_RP023_G2_ATAC"
],
"assay_term": {
"@id": "/assay-terms/OBI_0002762/",
"assay_slims": [
"chromatin accessibility"
],
"status": "released",
"term_name": "single-nucleus ATAC-seq"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [d0cc65d7-25b6-4677-bb6b-fa3ad7d9776c](/phenotypic-features/d0cc65d7-25b6-4677-bb6b-fa3ad7d9776c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [d1b8d684-9089-4797-b468-e66e6208a6a4](/phenotypic-features/d1b8d684-9089-4797-b468-e66e6208a6a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [5113685b-3e4a-4985-b418-d5b8a80c88fc](/phenotypic-features/5113685b-3e4a-4985-b418-d5b8a80c88fc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [d0131e87-f69e-47de-a1f5-7dbda60dabef](/phenotypic-features/d0131e87-f69e-47de-a1f5-7dbda60dabef/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [ed38e086-4d93-4d45-b2c4-e92658dbdb57](/phenotypic-features/ed38e086-4d93-4d45-b2c4-e92658dbdb57/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [5c44a3b3-503c-4045-becf-3e8a1f74fb42](/phenotypic-features/5c44a3b3-503c-4045-becf-3e8a1f74fb42/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [52075c15-8fbc-43f4-8ea7-daca38913ca8](/phenotypic-features/52075c15-8fbc-43f4-8ea7-daca38913ca8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [9a07089a-e55f-4366-921e-fc24aeb5118a](/phenotypic-features/9a07089a-e55f-4366-921e-fc24aeb5118a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [3190b852-4196-43c9-9da6-03869014b3bb](/phenotypic-features/3190b852-4196-43c9-9da6-03869014b3bb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3795BUZW](/human-donors/IGVFDO3795BUZW/) has in progress subobject phenotypic feature [05b2e6f0-0942-4a97-ba30-ab604675cecf](/phenotypic-features/05b2e6f0-0942-4a97-ba30-ab604675cecf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3795BUZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [774378d7-33a3-4ef6-856c-0ae15de83c29](/phenotypic-features/774378d7-33a3-4ef6-856c-0ae15de83c29/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [62744ae9-5ff1-439f-8b3a-adfc0eeb26ad](/phenotypic-features/62744ae9-5ff1-439f-8b3a-adfc0eeb26ad/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [f88331b4-90fa-49b3-82d2-e23fa74c59f5](/phenotypic-features/f88331b4-90fa-49b3-82d2-e23fa74c59f5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [cb20813a-9fc4-42a7-925b-a05ccade9a7a](/phenotypic-features/cb20813a-9fc4-42a7-925b-a05ccade9a7a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [bc3ceaf3-1a96-43dc-a6df-678fc3bd5f74](/phenotypic-features/bc3ceaf3-1a96-43dc-a6df-678fc3bd5f74/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1052TZWO](/human-donors/IGVFDO1052TZWO/) has in progress subobject phenotypic feature [4c25b550-2fa1-4f9c-a4c6-aa047749c900](/phenotypic-features/4c25b550-2fa1-4f9c-a4c6-aa047749c900/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1052TZWO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [b52127d9-b46f-4047-b2f5-3cd75d0933f0](/phenotypic-features/b52127d9-b46f-4047-b2f5-3cd75d0933f0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [30f0b56e-d6b3-43e1-8a81-6a16bb0e28ee](/phenotypic-features/30f0b56e-d6b3-43e1-8a81-6a16bb0e28ee/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [f3c96e1e-630f-47c2-8e2d-5c9ba8d18598](/phenotypic-features/f3c96e1e-630f-47c2-8e2d-5c9ba8d18598/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [72f27db2-904b-4967-b919-f7c013e2eec8](/phenotypic-features/72f27db2-904b-4967-b919-f7c013e2eec8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5228HTJC](/human-donors/IGVFDO5228HTJC/) has in progress subobject phenotypic feature [6398d5ed-9d64-42a5-bf1a-e4d9e52057b5](/phenotypic-features/6398d5ed-9d64-42a5-bf1a-e4d9e52057b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5228HTJC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [36f110b3-ce3c-4adb-acea-eaf2033ddc62](/phenotypic-features/36f110b3-ce3c-4adb-acea-eaf2033ddc62/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [f6f8a961-ff33-42a3-89a3-44c3f09fe474](/phenotypic-features/f6f8a961-ff33-42a3-89a3-44c3f09fe474/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [ede77913-c99e-4e14-90ec-baf07e24b231](/phenotypic-features/ede77913-c99e-4e14-90ec-baf07e24b231/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [f12ecc3c-67f0-4fce-8b6e-de7acb654b51](/phenotypic-features/f12ecc3c-67f0-4fce-8b6e-de7acb654b51/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [d3b01418-90c3-49c1-a68a-c78b0c579754](/phenotypic-features/d3b01418-90c3-49c1-a68a-c78b0c579754/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [b56bf52d-97da-4084-bf29-fe5ddcbca885](/phenotypic-features/b56bf52d-97da-4084-bf29-fe5ddcbca885/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [e40b23ca-8049-458d-9daa-2d9a7bfe205d](/phenotypic-features/e40b23ca-8049-458d-9daa-2d9a7bfe205d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [bf9c75cf-8f7f-44ab-ab3e-d796bc759162](/phenotypic-features/bf9c75cf-8f7f-44ab-ab3e-d796bc759162/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [0ffc3098-10e0-4829-bbfd-b484f751c849](/phenotypic-features/0ffc3098-10e0-4829-bbfd-b484f751c849/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5949WFOO](/human-donors/IGVFDO5949WFOO/) has in progress subobject phenotypic feature [9f8cdc92-50c6-4ce8-9924-2077353dc541](/phenotypic-features/9f8cdc92-50c6-4ce8-9924-2077353dc541/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5949WFOO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5949WFOO](/human-donors/IGVFDO5949WFOO/) has in progress subobject phenotypic feature [f8197fe3-5058-4e75-85ca-29bc4cfa5a2d](/phenotypic-features/f8197fe3-5058-4e75-85ca-29bc4cfa5a2d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5949WFOO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5949WFOO](/human-donors/IGVFDO5949WFOO/) has in progress subobject phenotypic feature [14d51ce6-d318-452e-b9c2-c1f789247a34](/phenotypic-features/14d51ce6-d318-452e-b9c2-c1f789247a34/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5949WFOO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5949WFOO](/human-donors/IGVFDO5949WFOO/) has in progress subobject phenotypic feature [f4e2208d-dfd8-41fe-aa02-9759027f1a12](/phenotypic-features/f4e2208d-dfd8-41fe-aa02-9759027f1a12/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5949WFOO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9247BEUS](/human-donors/IGVFDO9247BEUS/) has in progress subobject phenotypic feature [02c8dba8-d505-45a2-acca-b6bd3a8876cd](/phenotypic-features/02c8dba8-d505-45a2-acca-b6bd3a8876cd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9247BEUS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9247BEUS](/human-donors/IGVFDO9247BEUS/) has in progress subobject phenotypic feature [e774cecf-7269-4269-a9c8-ef242ff0930a](/phenotypic-features/e774cecf-7269-4269-a9c8-ef242ff0930a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9247BEUS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9247BEUS](/human-donors/IGVFDO9247BEUS/) has in progress subobject phenotypic feature [ab7bc349-14e7-4585-b950-ab3bdf626a1e](/phenotypic-features/ab7bc349-14e7-4585-b950-ab3bdf626a1e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9247BEUS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9247BEUS](/human-donors/IGVFDO9247BEUS/) has in progress subobject phenotypic feature [59f6e0a8-5a94-41c3-a3ad-b1982138f286](/phenotypic-features/59f6e0a8-5a94-41c3-a3ad-b1982138f286/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9247BEUS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8891KXRJ](/human-donors/IGVFDO8891KXRJ/) has in progress subobject phenotypic feature [67d610ff-1188-474e-b062-65d1c3cd425e](/phenotypic-features/67d610ff-1188-474e-b062-65d1c3cd425e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8891KXRJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8891KXRJ](/human-donors/IGVFDO8891KXRJ/) has in progress subobject phenotypic feature [6490cb03-ac22-485a-aa91-ac5cc4ac399c](/phenotypic-features/6490cb03-ac22-485a-aa91-ac5cc4ac399c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8891KXRJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8891KXRJ](/human-donors/IGVFDO8891KXRJ/) has in progress subobject phenotypic feature [f2101a81-e55f-43bb-a630-eb88c8dc202b](/phenotypic-features/f2101a81-e55f-43bb-a630-eb88c8dc202b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8891KXRJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8891KXRJ](/human-donors/IGVFDO8891KXRJ/) has in progress subobject phenotypic feature [ba7722d9-75b0-4b99-ab90-566c5038d6dc](/phenotypic-features/ba7722d9-75b0-4b99-ab90-566c5038d6dc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8891KXRJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [1e832ff1-71d0-41fc-9f36-fd4498dfee00](/phenotypic-features/1e832ff1-71d0-41fc-9f36-fd4498dfee00/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [c720825e-ee74-4c36-8a5e-9c70924435be](/phenotypic-features/c720825e-ee74-4c36-8a5e-9c70924435be/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [a307f67e-a27c-4f71-933b-8391d36a0ffc](/phenotypic-features/a307f67e-a27c-4f71-933b-8391d36a0ffc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [9c586031-f537-409b-8205-585a19621b3f](/phenotypic-features/9c586031-f537-409b-8205-585a19621b3f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [687e8b69-25f0-4bb5-969e-635dd2d3f4a5](/phenotypic-features/687e8b69-25f0-4bb5-969e-635dd2d3f4a5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4438WASY](/human-donors/IGVFDO4438WASY/) has in progress subobject phenotypic feature [f6830b8c-bd31-4ecc-868b-9167f991411f](/phenotypic-features/f6830b8c-bd31-4ecc-868b-9167f991411f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4438WASY/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [5aadb7a0-3ba4-46ce-a63b-737069e87fe2](/phenotypic-features/5aadb7a0-3ba4-46ce-a63b-737069e87fe2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [367239fb-e961-4d34-bf97-186fe47419cd](/phenotypic-features/367239fb-e961-4d34-bf97-186fe47419cd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [11fbe4b3-7cc6-46a9-a210-6deab3bc4d79](/phenotypic-features/11fbe4b3-7cc6-46a9-a210-6deab3bc4d79/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [49ab6d82-1b46-419b-8cc4-45d027be56fe](/phenotypic-features/49ab6d82-1b46-419b-8cc4-45d027be56fe/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [73b99e9c-b591-472b-ae45-76b617c7200c](/phenotypic-features/73b99e9c-b591-472b-ae45-76b617c7200c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8451NMBP](/human-donors/IGVFDO8451NMBP/) has in progress subobject phenotypic feature [f98a6805-7706-4960-afd9-0c28fdbd4b6a](/phenotypic-features/f98a6805-7706-4960-afd9-0c28fdbd4b6a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8451NMBP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [9a04e4d1-7a8c-4148-a9fa-9d0cc5b6b156](/phenotypic-features/9a04e4d1-7a8c-4148-a9fa-9d0cc5b6b156/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [0026a1b8-bc9b-4ca3-8550-db33dea01cf2](/phenotypic-features/0026a1b8-bc9b-4ca3-8550-db33dea01cf2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [20739539-1577-4aa9-a16f-e48042d342a1](/phenotypic-features/20739539-1577-4aa9-a16f-e48042d342a1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [d8416687-8d5b-433e-a553-eb11125a2fa6](/phenotypic-features/d8416687-8d5b-433e-a553-eb11125a2fa6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [be888d35-90a2-4dc6-8192-63ff7c0a544d](/phenotypic-features/be888d35-90a2-4dc6-8192-63ff7c0a544d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [6bbe54ee-eaea-42f2-a7a1-c71e9aef58bc](/phenotypic-features/6bbe54ee-eaea-42f2-a7a1-c71e9aef58bc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS1426FMMN](/measurement-sets/IGVFDS1426FMMN/) has sequence file(s): [IGVFFI4397OABQ](/sequence-files/IGVFFI4397OABQ/), [IGVFFI7356ROTG](/sequence-files/IGVFFI7356ROTG/), [IGVFFI0883PUDR](/sequence-files/IGVFFI0883PUDR/), [IGVFFI5418ATJN](/sequence-files/IGVFFI5418ATJN/), [IGVFFI1408DJHM](/sequence-files/IGVFFI1408DJHM/), [IGVFFI9341WWQE](/sequence-files/IGVFFI9341WWQE/), [IGVFFI8896PTXI](/sequence-files/IGVFFI8896PTXI/), [IGVFFI3682BCYK](/sequence-files/IGVFFI3682BCYK/), [IGVFFI2380FJPK](/sequence-files/IGVFFI2380FJPK/), [IGVFFI6465ZJFP](/sequence-files/IGVFFI6465ZJFP/), [IGVFFI2211XMVG](/sequence-files/IGVFFI2211XMVG/), [IGVFFI0783ZJYI](/sequence-files/IGVFFI0783ZJYI/), [IGVFFI0609CLEW](/sequence-files/IGVFFI0609CLEW/), [IGVFFI6609SBVF](/sequence-files/IGVFFI6609SBVF/), [IGVFFI5929JEDO](/sequence-files/IGVFFI5929JEDO/), [IGVFFI3947RDEN](/sequence-files/IGVFFI3947RDEN/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS1426FMMN/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS1426FMMN](/measurement-sets/IGVFDS1426FMMN/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS1426FMMN/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS1426FMMN](/measurement-sets/IGVFDS1426FMMN/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS1426FMMN/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T19:56:24.299735+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO9247BEUS/",
"accession": "IGVFDO9247BEUS",
"aliases": [
"igvf:corces_donor_BANN2149"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1278CNID/",
"accession": "IGVFDO1278CNID",
"aliases": [
"igvf:corces_donor_BANN1506"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1052TZWO/",
"accession": "IGVFDO1052TZWO",
"aliases": [
"igvf:corces_donor_BANN1851"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6489DOPG/",
"accession": "IGVFDO6489DOPG",
"aliases": [
"igvf:corces_donor_BANN2118"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8891KXRJ/",
"accession": "IGVFDO8891KXRJ",
"aliases": [
"igvf:corces_donor_BANN1737"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4438WASY/",
"accession": "IGVFDO4438WASY",
"aliases": [
"igvf:corces_donor_BANN1644"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3795BUZW/",
"accession": "IGVFDO3795BUZW",
"aliases": [
"igvf:corces_donor_BANN1311"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8451NMBP/",
"accession": "IGVFDO8451NMBP",
"aliases": [
"igvf:corces_donor_BANN1756"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9299YLNH/",
"accession": "IGVFDO9299YLNH",
"aliases": [
"igvf:corces_donor_BANN1921"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5228HTJC/",
"accession": "IGVFDO5228HTJC",
"aliases": [
"igvf:corces_donor_BANN1839"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5949WFOO/",
"accession": "IGVFDO5949WFOO",
"aliases": [
"igvf:corces_donor_BANN1957"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6316TGCK/",
"accession": "IGVFDO6316TGCK",
"aliases": [
"igvf:corces_donor_BANN1814"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI4397OABQ/",
"accession": "IGVFFI4397OABQ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L001_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:21:44.482272+00:00",
"file_format": "fastq",
"file_size": 380151081,
"href": "/sequence-files/IGVFFI4397OABQ/@@download/IGVFFI4397OABQ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/c09c921e-2b50-4a47-8b47-6c49fdc5b100/IGVFFI4397OABQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L001_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7356ROTG/",
"accession": "IGVFFI7356ROTG",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L001_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:21:47.509575+00:00",
"file_format": "fastq",
"file_size": 1546903611,
"href": "/sequence-files/IGVFFI7356ROTG/@@download/IGVFFI7356ROTG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/c6aebec6-5aec-445c-a0fb-df38609cf3a6/IGVFFI7356ROTG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L001_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0883PUDR/",
"accession": "IGVFFI0883PUDR",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L002_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:21:58.358382+00:00",
"file_format": "fastq",
"file_size": 1584063032,
"href": "/sequence-files/IGVFFI0883PUDR/@@download/IGVFFI0883PUDR.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/41abae14-ec75-4a69-903d-cf6cbb9878d8/IGVFFI0883PUDR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L002_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5418ATJN/",
"accession": "IGVFFI5418ATJN",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L002_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:22:03.424435+00:00",
"file_format": "fastq",
"file_size": 1592979767,
"href": "/sequence-files/IGVFFI5418ATJN/@@download/IGVFFI5418ATJN.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/73188c6e-3fbb-4a47-8bdd-4c246d3e84e4/IGVFFI5418ATJN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L002_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1408DJHM/",
"accession": "IGVFFI1408DJHM",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L001_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:21:50.151701+00:00",
"file_format": "fastq",
"file_size": 890296611,
"href": "/sequence-files/IGVFFI1408DJHM/@@download/IGVFFI1408DJHM.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/e282c150-95a5-434d-a856-ed0fe644c8e1/IGVFFI1408DJHM.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L001_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9341WWQE/",
"accession": "IGVFFI9341WWQE",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L003_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:22:09.129005+00:00",
"file_format": "fastq",
"file_size": 1575756084,
"href": "/sequence-files/IGVFFI9341WWQE/@@download/IGVFFI9341WWQE.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/fed88676-1eac-483b-9201-82ab1405ef4b/IGVFFI9341WWQE.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L003_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8896PTXI/",
"accession": "IGVFFI8896PTXI",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L004_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:22:28.474169+00:00",
"file_format": "fastq",
"file_size": 1592660578,
"href": "/sequence-files/IGVFFI8896PTXI/@@download/IGVFFI8896PTXI.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/29b019dd-8382-45ca-99c0-c1592f9ff0eb/IGVFFI8896PTXI.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L004_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3682BCYK/",
"accession": "IGVFFI3682BCYK",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L003_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:22:12.676140+00:00",
"file_format": "fastq",
"file_size": 902241548,
"href": "/sequence-files/IGVFFI3682BCYK/@@download/IGVFFI3682BCYK.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/10e6f8d1-d06a-433e-8060-813c1e31c67a/IGVFFI3682BCYK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L003_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2380FJPK/",
"accession": "IGVFFI2380FJPK",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L003_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:22:15.093328+00:00",
"file_format": "fastq",
"file_size": 1582333556,
"href": "/sequence-files/IGVFFI2380FJPK/@@download/IGVFFI2380FJPK.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/db18e171-42c4-48f7-ae11-079037bc4de6/IGVFFI2380FJPK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L003_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6465ZJFP/",
"accession": "IGVFFI6465ZJFP",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L002_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:22:00.587769+00:00",
"file_format": "fastq",
"file_size": 910840782,
"href": "/sequence-files/IGVFFI6465ZJFP/@@download/IGVFFI6465ZJFP.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/0dc1c51d-88f5-4eef-8fd4-b222cef715e0/IGVFFI6465ZJFP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L002_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2211XMVG/",
"accession": "IGVFFI2211XMVG",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L001_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:21:53.218642+00:00",
"file_format": "fastq",
"file_size": 1555634695,
"href": "/sequence-files/IGVFFI2211XMVG/@@download/IGVFFI2211XMVG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/1399feb4-ed5c-4d93-9175-9f749472ffcd/IGVFFI2211XMVG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L001_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0783ZJYI/",
"accession": "IGVFFI0783ZJYI",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L003_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:22:06.366850+00:00",
"file_format": "fastq",
"file_size": 386135753,
"href": "/sequence-files/IGVFFI0783ZJYI/@@download/IGVFFI0783ZJYI.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/6b86046a-31c5-42fb-818a-f8bef0d2b3a9/IGVFFI0783ZJYI.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L003_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0609CLEW/",
"accession": "IGVFFI0609CLEW",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L004_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:22:24.707218+00:00",
"file_format": "fastq",
"file_size": 907245080,
"href": "/sequence-files/IGVFFI0609CLEW/@@download/IGVFFI0609CLEW.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/4b7f2860-54a6-4082-b1b5-1100eed4331d/IGVFFI0609CLEW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L004_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6609SBVF/",
"accession": "IGVFFI6609SBVF",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L002_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:21:55.493282+00:00",
"file_format": "fastq",
"file_size": 389553787,
"href": "/sequence-files/IGVFFI6609SBVF/@@download/IGVFFI6609SBVF.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/8f9a79b6-3c6a-43bb-8a51-8a2a1e519e94/IGVFFI6609SBVF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L002_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5929JEDO/",
"accession": "IGVFFI5929JEDO",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L004_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:22:17.727166+00:00",
"file_format": "fastq",
"file_size": 385585427,
"href": "/sequence-files/IGVFFI5929JEDO/@@download/IGVFFI5929JEDO.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/7ec1af35-da02-44ab-89a6-fe526de65cf1/IGVFFI5929JEDO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L004_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3947RDEN/",
"accession": "IGVFFI3947RDEN",
"aliases": [
"igvf:corces_sequenceFile_ATAC_RP023_G2_P067_L004_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:22:21.539869+00:00",
"file_format": "fastq",
"file_size": 1585313186,
"href": "/sequence-files/IGVFFI3947RDEN/@@download/IGVFFI3947RDEN.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/1754280e-87b4-4f3e-a0ad-1e4456e01d32/IGVFFI3947RDEN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_RP023_G2_L002_P067_S14_L004_R1_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI7587TJLC/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS9014MGZR/",
"accession": "IGVFDS9014MGZR",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM7198XDQQ/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM7198XDQQ",
"aliases": [
"igvf:corces_multiplexedSample_RP023_G2"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (female, 52 years) posterior cingulate gyrus tissue; Homo sapiens (male, 87 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T22:21:44.482272+00:00",
"summary": "single-nucleus ATAC-seq (10x multiome)",
"uuid": "9244d118-cd2d-4517-933e-ac1784c5c2f9"
}