{
"@context": "/terms/",
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"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS1324EVBY",
"aliases": [
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],
"assay_term": {
"@id": "/assay-terms/OBI_0002631/",
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],
"status": "released",
"term_name": "single-cell RNA sequencing assay"
},
"audit": {
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{
"category": "missing publication",
"detail": "In vitro system [IGVFSM4166RBAA](/in-vitro-systems/IGVFSM4166RBAA/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM4166RBAA/"
},
{
"category": "missing publication",
"detail": "Measurement set [IGVFDS1324EVBY](/measurement-sets/IGVFDS1324EVBY/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS1324EVBY/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS1324EVBY](/measurement-sets/IGVFDS1324EVBY/) has in progress subobject tabular file [IGVFFI5522PXUM](/tabular-files/IGVFFI5522PXUM/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS1324EVBY/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS1324EVBY](/measurement-sets/IGVFDS1324EVBY/) has in progress subobject tabular file [IGVFFI0400MBIM](/tabular-files/IGVFFI0400MBIM/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS1324EVBY/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS1324EVBY](/measurement-sets/IGVFDS1324EVBY/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS1324EVBY/"
}
]
},
"award": {
"@id": "/awards/HG011986/",
"component": "mapping",
"contact_pi": {
"@id": "/users/33c6eb70-e143-4f77-9661-4b3905737daa/",
"title": "Jason Buenrostro"
},
"title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
},
"control_for": [],
"controlled_access": true,
"creation_timestamp": "2024-08-20T15:01:56.691783+00:00",
"data_use_limitation_summaries": [
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],
"donors": [
{
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},
{
"@id": "/human-donors/IGVFDO6556DSRS/",
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},
{
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},
{
"@id": "/human-donors/IGVFDO0452ROLO/",
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"buenrostro-bernstein:Donor 1867"
],
"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2628QOSP/",
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},
{
"@id": "/human-donors/IGVFDO5829IPZL/",
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},
{
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"taxa": "Homo sapiens"
},
{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7817ENDD/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0143YSWQ/",
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"buenrostro-bernstein:Donor 1860"
],
"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0144AKUR/",
"accession": "IGVFDO0144AKUR",
"aliases": [
"buenrostro-bernstein:Donor 1850"
],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7476FWEA/",
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
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},
{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7956CWXZ/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6553AADC/",
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"aliases": [
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],
"sex": "unspecified",
"status": "released",
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},
{
"@id": "/human-donors/IGVFDO5342CGKC/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0392YIJG/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1697JGEF/",
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5686BULO/",
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],
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1165TQMX/",
"accession": "IGVFDO1165TQMX",
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0674VHCY/",
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"aliases": [
"buenrostro-bernstein:Donor 1896"
],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3154SUBV/",
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0916PWWE/",
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},
{
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"taxa": "Homo sapiens"
},
{
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"sex": "unspecified",
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},
{
"@id": "/human-donors/IGVFDO2372UULO/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5074GHND/",
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"taxa": "Homo sapiens"
},
{
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"taxa": "Homo sapiens"
},
{
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"taxa": "Homo sapiens"
},
{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3773GAHC/",
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},
{
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],
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4451SLQW/",
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},
{
"@id": "/human-donors/IGVFDO2044WGSW/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8772PWON/",
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},
{
"@id": "/human-donors/IGVFDO6295KHUE/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5748WCDL/",
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3364ORGK/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4197GLLD/",
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"taxa": "Homo sapiens"
},
{
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"taxa": "Homo sapiens"
},
{
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},
{
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0455AULY/",
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],
"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1215CYXN/",
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},
{
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},
{
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"taxa": "Homo sapiens"
},
{
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"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1318DUVG/",
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"taxa": "Homo sapiens"
},
{
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"taxa": "Homo sapiens"
},
{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1656HYLL/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6969ZGNB/",
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],
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7983CLUG/",
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"aliases": [
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],
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2142TSPQ/",
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2343ZVKW/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1535CIEE/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6675DJLJ/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3170VPEQ/",
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"aliases": [
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2627YUXH/",
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"aliases": [
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],
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3937NOVL/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5446TLJJ/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0597VIVH/",
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7542OMCX/",
"accession": "IGVFDO7542OMCX",
"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0875HNRV/",
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"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2015BBZM/",
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],
"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0233FJJF/",
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],
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1778GJAD/",
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6694QTLS/",
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],
"sex": "unspecified",
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"taxa": "Homo sapiens"
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