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INDEXED
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MeasurementSet
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IGVFDS1293SYJM
IGVFDS1293SYJM
released
Json view
File Set Type
experimental data
Summary
snMCT-seq
Assay Term
single-nucleus methylcytosine and transcriptome sequencing assay
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 9 days
Protocols
https://www.protocols.io/view/snmcat-v2-x54v9jby1g3e/v2
Aliases
chongyuan-luo:pgp_snmct_C38_day9
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
8 items
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0843DQYQ
fastq
reads
R2
2
Illumina NovaSeq X
2
4.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI1537POAJ
fastq
reads
R1
1
Illumina NovaSeq X
1
4.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI2088RHAM
fastq
reads
R2
2
Illumina NovaSeq X
3
4.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI3336NMLT
fastq
reads
R2
2
Illumina NovaSeq X
4
4.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI4126SPKO
fastq
reads
R1
1
Illumina NovaSeq X
4
4.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI4493RIWD
fastq
reads
R2
2
Illumina NovaSeq X
1
4.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI5899WHPR
fastq
reads
R1
1
Illumina NovaSeq X
3
4.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI8831BBPJ
fastq
reads
R1
1
Illumina NovaSeq X
2
4.6 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM1709WMSR
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 9 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO2328XGNY
chongyuan-luo:C38
unspecified
Homo sapiens