{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS1215JKPP/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS1215JKPP",
"aliases": [
"igvf:corces_measurementSet_RP003_G7_RNA"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4015EJFT](/human-donors/IGVFDO4015EJFT/) has in progress subobject phenotypic feature [f0b8ca79-5f85-4a56-9a87-5b13f9de57e9](/phenotypic-features/f0b8ca79-5f85-4a56-9a87-5b13f9de57e9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4015EJFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4015EJFT](/human-donors/IGVFDO4015EJFT/) has in progress subobject phenotypic feature [5d50dea9-44df-4bf4-88fe-a4ab6dab930f](/phenotypic-features/5d50dea9-44df-4bf4-88fe-a4ab6dab930f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4015EJFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4015EJFT](/human-donors/IGVFDO4015EJFT/) has in progress subobject phenotypic feature [d5129ce9-3b55-4709-829e-82ec7ce17860](/phenotypic-features/d5129ce9-3b55-4709-829e-82ec7ce17860/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4015EJFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4015EJFT](/human-donors/IGVFDO4015EJFT/) has in progress subobject phenotypic feature [fcbaf2ef-470f-4cc6-8163-283ab282b39d](/phenotypic-features/fcbaf2ef-470f-4cc6-8163-283ab282b39d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4015EJFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [cf42e423-497d-4ce1-b16c-de4b75c47c15](/phenotypic-features/cf42e423-497d-4ce1-b16c-de4b75c47c15/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [fcb965cc-7b61-4d20-822d-bd5a898093b5](/phenotypic-features/fcb965cc-7b61-4d20-822d-bd5a898093b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [4ce05436-3aba-4ff2-adfe-7b35c9701431](/phenotypic-features/4ce05436-3aba-4ff2-adfe-7b35c9701431/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [ea3dee25-4ac9-4957-a68d-c098ce615ca3](/phenotypic-features/ea3dee25-4ac9-4957-a68d-c098ce615ca3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [20ce9114-8f44-47dc-b1ff-6a44688bf47a](/phenotypic-features/20ce9114-8f44-47dc-b1ff-6a44688bf47a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7732SCUF](/human-donors/IGVFDO7732SCUF/) has in progress subobject phenotypic feature [911b4784-9ee9-46c2-9cf7-9f69278ab6d2](/phenotypic-features/911b4784-9ee9-46c2-9cf7-9f69278ab6d2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7732SCUF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7732SCUF](/human-donors/IGVFDO7732SCUF/) has in progress subobject phenotypic feature [9d015d81-ece3-4dfd-8ab8-f27043345220](/phenotypic-features/9d015d81-ece3-4dfd-8ab8-f27043345220/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7732SCUF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7732SCUF](/human-donors/IGVFDO7732SCUF/) has in progress subobject phenotypic feature [64e0b093-a25e-4821-91dc-13e0423a4012](/phenotypic-features/64e0b093-a25e-4821-91dc-13e0423a4012/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7732SCUF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7732SCUF](/human-donors/IGVFDO7732SCUF/) has in progress subobject phenotypic feature [98558ab7-1343-41e5-8118-87284cd16293](/phenotypic-features/98558ab7-1343-41e5-8118-87284cd16293/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7732SCUF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [c1af321e-187f-465d-82c2-7f3167821d82](/phenotypic-features/c1af321e-187f-465d-82c2-7f3167821d82/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [d8974890-5de1-43a0-bbdd-662642652835](/phenotypic-features/d8974890-5de1-43a0-bbdd-662642652835/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [f47cb079-e39d-44ed-aa9b-ae76dd89e912](/phenotypic-features/f47cb079-e39d-44ed-aa9b-ae76dd89e912/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [3e9cf626-9ed1-49cb-a08d-99e7e9d01e03](/phenotypic-features/3e9cf626-9ed1-49cb-a08d-99e7e9d01e03/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [5bbb08a5-85e9-4c47-b3a0-47e8c124020a](/phenotypic-features/5bbb08a5-85e9-4c47-b3a0-47e8c124020a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [f3293daa-5b2a-482d-b783-e74292e01215](/phenotypic-features/f3293daa-5b2a-482d-b783-e74292e01215/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1464XWYC](/human-donors/IGVFDO1464XWYC/) has in progress subobject phenotypic feature [0944c07c-192b-4750-9fa2-98e9d416951d](/phenotypic-features/0944c07c-192b-4750-9fa2-98e9d416951d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1464XWYC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1464XWYC](/human-donors/IGVFDO1464XWYC/) has in progress subobject phenotypic feature [b7673a14-200c-4d11-99af-42748f5f2b5a](/phenotypic-features/b7673a14-200c-4d11-99af-42748f5f2b5a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1464XWYC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1464XWYC](/human-donors/IGVFDO1464XWYC/) has in progress subobject phenotypic feature [5966062a-b342-4b70-9aa9-9db9c46d5bb3](/phenotypic-features/5966062a-b342-4b70-9aa9-9db9c46d5bb3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1464XWYC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1464XWYC](/human-donors/IGVFDO1464XWYC/) has in progress subobject phenotypic feature [150696e6-cb05-4577-bfa3-59c11882d502](/phenotypic-features/150696e6-cb05-4577-bfa3-59c11882d502/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1464XWYC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1464XWYC](/human-donors/IGVFDO1464XWYC/) has in progress subobject phenotypic feature [2853f35c-e0bb-40d8-8f0a-6d998a7db51a](/phenotypic-features/2853f35c-e0bb-40d8-8f0a-6d998a7db51a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1464XWYC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [b680dc57-e349-4ea9-8cb8-5c5426aaad31](/phenotypic-features/b680dc57-e349-4ea9-8cb8-5c5426aaad31/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [3e3c67a3-add2-494d-a64d-c47dd7d5c897](/phenotypic-features/3e3c67a3-add2-494d-a64d-c47dd7d5c897/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [78a7c349-10a5-4b5a-9661-21b6831612a7](/phenotypic-features/78a7c349-10a5-4b5a-9661-21b6831612a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [a04cdee4-28e8-4690-acb4-48bab45f7927](/phenotypic-features/a04cdee4-28e8-4690-acb4-48bab45f7927/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4273OHGB](/human-donors/IGVFDO4273OHGB/) has in progress subobject phenotypic feature [a8a7eb19-35fc-4266-87cf-32ecd8e25f0b](/phenotypic-features/a8a7eb19-35fc-4266-87cf-32ecd8e25f0b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4273OHGB/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [213d8bcb-11ce-4b7f-ae80-8a3e9b73ae83](/phenotypic-features/213d8bcb-11ce-4b7f-ae80-8a3e9b73ae83/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [5c5d17b8-c589-44ff-8c25-ac4b8b32e0fc](/phenotypic-features/5c5d17b8-c589-44ff-8c25-ac4b8b32e0fc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [b26dcc82-a5c2-42f3-a63e-a43fd9359ebf](/phenotypic-features/b26dcc82-a5c2-42f3-a63e-a43fd9359ebf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [27767bd2-d2f7-4c12-a080-0891f07591b7](/phenotypic-features/27767bd2-d2f7-4c12-a080-0891f07591b7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [f57d3e32-48bd-4719-8d01-68046dd4734c](/phenotypic-features/f57d3e32-48bd-4719-8d01-68046dd4734c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [e4feb5fc-ff23-4699-a4d2-620d59dcdd3e](/phenotypic-features/e4feb5fc-ff23-4699-a4d2-620d59dcdd3e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [8e88e2ab-61fc-482b-a4b5-416755a847bc](/phenotypic-features/8e88e2ab-61fc-482b-a4b5-416755a847bc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [22131022-5110-4ae2-91a6-98c3dcc35ee0](/phenotypic-features/22131022-5110-4ae2-91a6-98c3dcc35ee0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [30a806f6-8eeb-410a-a2db-f5b64f11b294](/phenotypic-features/30a806f6-8eeb-410a-a2db-f5b64f11b294/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7815RLQM](/human-donors/IGVFDO7815RLQM/) has in progress subobject phenotypic feature [9efd524f-1e99-47d1-bc9e-4a255f27518b](/phenotypic-features/9efd524f-1e99-47d1-bc9e-4a255f27518b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7815RLQM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7815RLQM](/human-donors/IGVFDO7815RLQM/) has in progress subobject phenotypic feature [364b434d-ff94-41a6-8bc8-e7d4ecf7e9f2](/phenotypic-features/364b434d-ff94-41a6-8bc8-e7d4ecf7e9f2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7815RLQM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7815RLQM](/human-donors/IGVFDO7815RLQM/) has in progress subobject phenotypic feature [ed079915-a900-462e-a36e-c0e48a903def](/phenotypic-features/ed079915-a900-462e-a36e-c0e48a903def/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7815RLQM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7815RLQM](/human-donors/IGVFDO7815RLQM/) has in progress subobject phenotypic feature [f4ab5e93-a3e5-4c14-838b-3942b4a35503](/phenotypic-features/f4ab5e93-a3e5-4c14-838b-3942b4a35503/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7815RLQM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7815RLQM](/human-donors/IGVFDO7815RLQM/) has in progress subobject phenotypic feature [2a8dbe37-d0d6-41e4-8812-35f0f886c109](/phenotypic-features/2a8dbe37-d0d6-41e4-8812-35f0f886c109/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7815RLQM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7815RLQM](/human-donors/IGVFDO7815RLQM/) has in progress subobject phenotypic feature [3bd48438-1788-411d-b420-dc33fb0df9da](/phenotypic-features/3bd48438-1788-411d-b420-dc33fb0df9da/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7815RLQM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [fff30f45-9273-47a0-847f-0619e27db9f1](/phenotypic-features/fff30f45-9273-47a0-847f-0619e27db9f1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [e469ed8e-b7b3-43ab-911f-20f855038419](/phenotypic-features/e469ed8e-b7b3-43ab-911f-20f855038419/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [99530794-7cba-40b4-a9d0-816f682a6751](/phenotypic-features/99530794-7cba-40b4-a9d0-816f682a6751/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [b9914545-281c-4c85-add2-46440dec3556](/phenotypic-features/b9914545-281c-4c85-add2-46440dec3556/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [f002bd57-9c69-46f5-baeb-02ef36f0ae95](/phenotypic-features/f002bd57-9c69-46f5-baeb-02ef36f0ae95/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [457ba560-b6d1-4bea-b7fa-c043ca79ab7b](/phenotypic-features/457ba560-b6d1-4bea-b7fa-c043ca79ab7b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [5c44a3b3-503c-4045-becf-3e8a1f74fb42](/phenotypic-features/5c44a3b3-503c-4045-becf-3e8a1f74fb42/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [d1b8d684-9089-4797-b468-e66e6208a6a4](/phenotypic-features/d1b8d684-9089-4797-b468-e66e6208a6a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [ed38e086-4d93-4d45-b2c4-e92658dbdb57](/phenotypic-features/ed38e086-4d93-4d45-b2c4-e92658dbdb57/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [5113685b-3e4a-4985-b418-d5b8a80c88fc](/phenotypic-features/5113685b-3e4a-4985-b418-d5b8a80c88fc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [d0cc65d7-25b6-4677-bb6b-fa3ad7d9776c](/phenotypic-features/d0cc65d7-25b6-4677-bb6b-fa3ad7d9776c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6489DOPG](/human-donors/IGVFDO6489DOPG/) has in progress subobject phenotypic feature [d0131e87-f69e-47de-a1f5-7dbda60dabef](/phenotypic-features/d0131e87-f69e-47de-a1f5-7dbda60dabef/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6489DOPG/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [1baae586-6df7-4bd4-b45d-715e7c843036](/phenotypic-features/1baae586-6df7-4bd4-b45d-715e7c843036/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [3101c455-2038-49a5-9ba3-d6d44b02e1af](/phenotypic-features/3101c455-2038-49a5-9ba3-d6d44b02e1af/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [f302fb2e-c140-4148-a63f-4995c94219cd](/phenotypic-features/f302fb2e-c140-4148-a63f-4995c94219cd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [8571b362-6133-4f95-8a7d-3f8eadd9f3e7](/phenotypic-features/8571b362-6133-4f95-8a7d-3f8eadd9f3e7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [a641a480-5815-4668-9082-c3eea81343dd](/phenotypic-features/a641a480-5815-4668-9082-c3eea81343dd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [0bb4a2a6-714d-4f1b-b1ca-f553eaddf065](/phenotypic-features/0bb4a2a6-714d-4f1b-b1ca-f553eaddf065/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS1215JKPP](/measurement-sets/IGVFDS1215JKPP/) has sequence file(s): [IGVFFI5815BZXG](/sequence-files/IGVFFI5815BZXG/), [IGVFFI6267ERTT](/sequence-files/IGVFFI6267ERTT/), [IGVFFI4339ITZE](/sequence-files/IGVFFI4339ITZE/), [IGVFFI2342MDUV](/sequence-files/IGVFFI2342MDUV/), [IGVFFI7292PIEQ](/sequence-files/IGVFFI7292PIEQ/), [IGVFFI0795YFHA](/sequence-files/IGVFFI0795YFHA/), [IGVFFI5979FCHW](/sequence-files/IGVFFI5979FCHW/), [IGVFFI7976AAXP](/sequence-files/IGVFFI7976AAXP/), [IGVFFI0940VENG](/sequence-files/IGVFFI0940VENG/), [IGVFFI9742GIWR](/sequence-files/IGVFFI9742GIWR/), [IGVFFI1363XYJQ](/sequence-files/IGVFFI1363XYJQ/), [IGVFFI7339JXDS](/sequence-files/IGVFFI7339JXDS/), [IGVFFI6172WYDA](/sequence-files/IGVFFI6172WYDA/), [IGVFFI6970FKWV](/sequence-files/IGVFFI6970FKWV/), [IGVFFI6017UPCH](/sequence-files/IGVFFI6017UPCH/), [IGVFFI8072RGCP](/sequence-files/IGVFFI8072RGCP/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS1215JKPP/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS1215JKPP](/measurement-sets/IGVFDS1215JKPP/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS1215JKPP/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS1215JKPP](/measurement-sets/IGVFDS1215JKPP/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS1215JKPP/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T21:40:29.024779+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO5214IKNF/",
"accession": "IGVFDO5214IKNF",
"aliases": [
"igvf:corces_donor_BANN1070"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0112XZXT/",
"accession": "IGVFDO0112XZXT",
"aliases": [
"igvf:corces_donor_BANN0218"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7732SCUF/",
"accession": "IGVFDO7732SCUF",
"aliases": [
"igvf:corces_donor_BANN0351"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4015EJFT/",
"accession": "IGVFDO4015EJFT",
"aliases": [
"igvf:corces_donor_BANN0526"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1464XWYC/",
"accession": "IGVFDO1464XWYC",
"aliases": [
"igvf:corces_donor_BANN1809"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0802OVOD/",
"accession": "IGVFDO0802OVOD",
"aliases": [
"igvf:corces_donor_BANN1030"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3971UIZC/",
"accession": "IGVFDO3971UIZC",
"aliases": [
"igvf:corces_donor_BANN0217"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4273OHGB/",
"accession": "IGVFDO4273OHGB",
"aliases": [
"igvf:corces_donor_BANN0322"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7815RLQM/",
"accession": "IGVFDO7815RLQM",
"aliases": [
"igvf:corces_donor_BANN1504"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0411QFOF/",
"accession": "IGVFDO0411QFOF",
"aliases": [
"igvf:corces_donor_BANN1750"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6489DOPG/",
"accession": "IGVFDO6489DOPG",
"aliases": [
"igvf:corces_donor_BANN2118"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5410JIJT/",
"accession": "IGVFDO5410JIJT",
"aliases": [
"igvf:corces_donor_BANN0919"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI5815BZXG/",
"accession": "IGVFFI5815BZXG",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L005_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:10:33.816552+00:00",
"file_format": "fastq",
"file_size": 1543484034,
"href": "/sequence-files/IGVFFI5815BZXG/@@download/IGVFFI5815BZXG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/8c5faeb3-27b5-4b73-a504-11c9f973429e/IGVFFI5815BZXG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L005_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6267ERTT/",
"accession": "IGVFFI6267ERTT",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L006_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:10:46.323118+00:00",
"file_format": "fastq",
"file_size": 1480968403,
"href": "/sequence-files/IGVFFI6267ERTT/@@download/IGVFFI6267ERTT.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/44b949c5-24b7-475c-ba19-e51eea9dff01/IGVFFI6267ERTT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L006_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4339ITZE/",
"accession": "IGVFFI4339ITZE",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:10:52.806216+00:00",
"file_format": "fastq",
"file_size": 397042396,
"href": "/sequence-files/IGVFFI4339ITZE/@@download/IGVFFI4339ITZE.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/679ac8b7-de83-4026-ab2d-940a030ca836/IGVFFI4339ITZE.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L007_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2342MDUV/",
"accession": "IGVFFI2342MDUV",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L008_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:11:09.710609+00:00",
"file_format": "fastq",
"file_size": 367074252,
"href": "/sequence-files/IGVFFI2342MDUV/@@download/IGVFFI2342MDUV.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/a2c933d8-403a-4e2a-8014-f136a3625d64/IGVFFI2342MDUV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L008_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7292PIEQ/",
"accession": "IGVFFI7292PIEQ",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L005_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:10:36.584032+00:00",
"file_format": "fastq",
"file_size": 3330239183,
"href": "/sequence-files/IGVFFI7292PIEQ/@@download/IGVFFI7292PIEQ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/88e5a06b-7531-418d-a43a-b6200dbc433a/IGVFFI7292PIEQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L005_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0795YFHA/",
"accession": "IGVFFI0795YFHA",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L006_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:10:42.496054+00:00",
"file_format": "fastq",
"file_size": 408743170,
"href": "/sequence-files/IGVFFI0795YFHA/@@download/IGVFFI0795YFHA.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/e1bbf8e3-a4dc-4710-9d05-d0fb6e452a2d/IGVFFI0795YFHA.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L006_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5979FCHW/",
"accession": "IGVFFI5979FCHW",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:10:58.443291+00:00",
"file_format": "fastq",
"file_size": 1407281694,
"href": "/sequence-files/IGVFFI5979FCHW/@@download/IGVFFI5979FCHW.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/2a379164-ec7c-4764-baf4-9898001a644d/IGVFFI5979FCHW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7976AAXP/",
"accession": "IGVFFI7976AAXP",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:11:01.896928+00:00",
"file_format": "fastq",
"file_size": 3033381279,
"href": "/sequence-files/IGVFFI7976AAXP/@@download/IGVFFI7976AAXP.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/2c735890-0232-49c7-aeeb-7ff6cdc2b9e4/IGVFFI7976AAXP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L007_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0940VENG/",
"accession": "IGVFFI0940VENG",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L008_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:11:05.263435+00:00",
"file_format": "fastq",
"file_size": 372200439,
"href": "/sequence-files/IGVFFI0940VENG/@@download/IGVFFI0940VENG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/96b7aac4-a8c0-4e27-8942-52d1982398a5/IGVFFI0940VENG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L008_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9742GIWR/",
"accession": "IGVFFI9742GIWR",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L005_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:10:28.229182+00:00",
"file_format": "fastq",
"file_size": 434707736,
"href": "/sequence-files/IGVFFI9742GIWR/@@download/IGVFFI9742GIWR.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/53e4e7f2-988b-4b70-8c17-3a236957d28f/IGVFFI9742GIWR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L005_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1363XYJQ/",
"accession": "IGVFFI1363XYJQ",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L008_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:11:15.713472+00:00",
"file_format": "fastq",
"file_size": 2850943637,
"href": "/sequence-files/IGVFFI1363XYJQ/@@download/IGVFFI1363XYJQ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/61fa99f6-3a1a-4bf8-b45c-d17f5c63be6c/IGVFFI1363XYJQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L008_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7339JXDS/",
"accession": "IGVFFI7339JXDS",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L005_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:10:30.535288+00:00",
"file_format": "fastq",
"file_size": 428229270,
"href": "/sequence-files/IGVFFI7339JXDS/@@download/IGVFFI7339JXDS.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/ad2d227f-5cb2-4bbf-95d3-491aba139390/IGVFFI7339JXDS.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L005_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6172WYDA/",
"accession": "IGVFFI6172WYDA",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L006_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:10:39.647082+00:00",
"file_format": "fastq",
"file_size": 416600082,
"href": "/sequence-files/IGVFFI6172WYDA/@@download/IGVFFI6172WYDA.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/ee6fc831-37b9-4166-b95a-609ee1cdd29f/IGVFFI6172WYDA.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L006_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6970FKWV/",
"accession": "IGVFFI6970FKWV",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L006_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:10:49.091708+00:00",
"file_format": "fastq",
"file_size": 3199101217,
"href": "/sequence-files/IGVFFI6970FKWV/@@download/IGVFFI6970FKWV.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/4a2861dd-627a-42c5-9be8-b2afc0c22017/IGVFFI6970FKWV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L006_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6017UPCH/",
"accession": "IGVFFI6017UPCH",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L007_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:10:55.651982+00:00",
"file_format": "fastq",
"file_size": 390912337,
"href": "/sequence-files/IGVFFI6017UPCH/@@download/IGVFFI6017UPCH.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/d006ad82-4065-4eb6-9b7d-e4ba665c8fe3/IGVFFI6017UPCH.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L007_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8072RGCP/",
"accession": "IGVFFI8072RGCP",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP003_G7_P054_L008_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T15:11:12.635087+00:00",
"file_format": "fastq",
"file_size": 1320716947,
"href": "/sequence-files/IGVFFI8072RGCP/@@download/IGVFFI8072RGCP.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/88e26606-8e35-4b5b-b031-0bae1627dbd3/IGVFFI8072RGCP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP003_G7_L007_P054_S26_L008_R1_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI8751YQRY/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS7931RONP/",
"accession": "IGVFDS7931RONP",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM0965JCVG/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM0965JCVG",
"aliases": [
"igvf:corces_multiplexedSample_RP003_G7"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 81 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 86 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T15:10:28.229182+00:00",
"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "125f29b6-34ad-44aa-a304-879fd55c41fd"
}