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IGVFDS1149ZGJI

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 605)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 1781
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
R2
8376
Read 2, Barcode index
22V3MJLT3
3.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8376
Read 1
22V3MJLT3
2.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8386
Read 1
22V3MJLT3
2.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8386
Read 2, Barcode index
22V3MJLT3
3.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8396
Read 1
22V3MJLT3
2.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8396
Read 2, Barcode index
22V3MJLT3
3.9 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 605)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • ali-mortazavi:773_CASTJ_10M
  • buenrostro-bernstein:Donor 2071
male
Mus musculus

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 845
Jason Buenrostro, Broad