{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS1147YWRU/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS1147YWRU",
"aliases": [
"ali-mortazavi:011_67D_illumina"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000751](/sample-terms/NTR_0000751/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000751/"
},
{
"category": "missing publication",
"detail": "Measurement set [IGVFDS1147YWRU](/measurement-sets/IGVFDS1147YWRU/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS1147YWRU/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS1147YWRU](/measurement-sets/IGVFDS1147YWRU/) has in progress subobject tabular file [IGVFFI1138MCVX](/tabular-files/IGVFFI1138MCVX/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS1147YWRU/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS1147YWRU](/measurement-sets/IGVFDS1147YWRU/) has in progress subobject tabular file [IGVFFI2591OFQO](/tabular-files/IGVFFI2591OFQO/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS1147YWRU/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000647](/sample-terms/NTR_0000647/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000647/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000750](/sample-terms/NTR_0000750/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000750/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000646](/sample-terms/NTR_0000646/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000646/"
},
{
"category": "mismatched status",
"detail": "Released multiplexed sample [IGVFSM3969LFGC](/multiplexed-samples/IGVFSM3969LFGC/) has in progress subobject tabular file [IGVFFI5536TVIR](/tabular-files/IGVFFI5536TVIR/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/multiplexed-samples/IGVFSM3969LFGC/"
},
{
"category": "missing publication",
"detail": "Multiplexed sample [IGVFSM3969LFGC](/multiplexed-samples/IGVFSM3969LFGC/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/multiplexed-samples/IGVFSM3969LFGC/"
}
]
},
"award": {
"@id": "/awards/HG012077/",
"component": "mapping",
"contact_pi": {
"@id": "/users/2c33e192-e815-4384-a220-72a0992cbe24/",
"title": "Ali Mortazavi"
},
"title": "Center for Mouse Genomic Variation at Single Cell Resolution"
},
"control_for": [],
"creation_timestamp": "2023-10-14T20:41:06.400536+00:00",
"data_use_limitation_summaries": [
"no certificate"
],
"donors": [
{
"@id": "/rodent-donors/IGVFDO7062NBTQ/",
"accession": "IGVFDO7062NBTQ",
"aliases": [
"ali-mortazavi:079_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5177QEWF/",
"accession": "IGVFDO5177QEWF",
"aliases": [
"ali-mortazavi:063_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5183UZGS/",
"accession": "IGVFDO5183UZGS",
"aliases": [
"ali-mortazavi:021_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5539RLXJ/",
"accession": "IGVFDO5539RLXJ",
"aliases": [
"ali-mortazavi:029_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4707SGWM/",
"accession": "IGVFDO4707SGWM",
"aliases": [
"ali-mortazavi:051_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8698PVAJ/",
"accession": "IGVFDO8698PVAJ",
"aliases": [
"ali-mortazavi:034_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5085MJSP/",
"accession": "IGVFDO5085MJSP",
"aliases": [
"ali-mortazavi:048_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4725SNCJ/",
"accession": "IGVFDO4725SNCJ",
"aliases": [
"ali-mortazavi:017_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3534MDFF/",
"accession": "IGVFDO3534MDFF",
"aliases": [
"ali-mortazavi:046_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5872DFML/",
"accession": "IGVFDO5872DFML",
"aliases": [
"ali-mortazavi:094_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8152XDDC/",
"accession": "IGVFDO8152XDDC",
"aliases": [
"ali-mortazavi:090_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2106EEWB/",
"accession": "IGVFDO2106EEWB",
"aliases": [
"ali-mortazavi:078_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5502NJPS/",
"accession": "IGVFDO5502NJPS",
"aliases": [
"ali-mortazavi:038_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7951JDSP/",
"accession": "IGVFDO7951JDSP",
"aliases": [
"ali-mortazavi:026_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0681EHNP/",
"accession": "IGVFDO0681EHNP",
"aliases": [
"ali-mortazavi:052_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6112GRYR/",
"accession": "IGVFDO6112GRYR",
"aliases": [
"ali-mortazavi:059_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6219LVKW/",
"accession": "IGVFDO6219LVKW",
"aliases": [
"ali-mortazavi:032_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9510ILZG/",
"accession": "IGVFDO9510ILZG",
"aliases": [
"ali-mortazavi:053_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0430HQIU/",
"accession": "IGVFDO0430HQIU",
"aliases": [
"ali-mortazavi:041_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3436ZMLY/",
"accession": "IGVFDO3436ZMLY",
"aliases": [
"ali-mortazavi:091_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3640WUBU/",
"accession": "IGVFDO3640WUBU",
"aliases": [
"ali-mortazavi:066_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3662UKFW/",
"accession": "IGVFDO3662UKFW",
"aliases": [
"ali-mortazavi:087_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0026YRCR/",
"accession": "IGVFDO0026YRCR",
"aliases": [
"ali-mortazavi:018_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9142EUBJ/",
"accession": "IGVFDO9142EUBJ",
"aliases": [
"ali-mortazavi:096_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1452VDIT/",
"accession": "IGVFDO1452VDIT",
"aliases": [
"ali-mortazavi:035_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3207TERA/",
"accession": "IGVFDO3207TERA",
"aliases": [
"ali-mortazavi:086_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1643VEDI/",
"accession": "IGVFDO1643VEDI",
"aliases": [
"ali-mortazavi:019_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4469VYEZ/",
"accession": "IGVFDO4469VYEZ",
"aliases": [
"ali-mortazavi:073_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6066JIEJ/",
"accession": "IGVFDO6066JIEJ",
"aliases": [
"ali-mortazavi:043_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4546RHSG/",
"accession": "IGVFDO4546RHSG",
"aliases": [
"ali-mortazavi:027_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6124WGNO/",
"accession": "IGVFDO6124WGNO",
"aliases": [
"ali-mortazavi:042_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6141KSSQ/",
"accession": "IGVFDO6141KSSQ",
"aliases": [
"ali-mortazavi:024_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8276XXVT/",
"accession": "IGVFDO8276XXVT",
"aliases": [
"ali-mortazavi:074_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5523UFUN/",
"accession": "IGVFDO5523UFUN",
"aliases": [
"ali-mortazavi:070_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2301HIUQ/",
"accession": "IGVFDO2301HIUQ",
"aliases": [
"ali-mortazavi:067_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1477BPVO/",
"accession": "IGVFDO1477BPVO",
"aliases": [
"ali-mortazavi:088_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3655FKMR/",
"accession": "IGVFDO3655FKMR",
"aliases": [
"ali-mortazavi:025_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2645GUSC/",
"accession": "IGVFDO2645GUSC",
"aliases": [
"ali-mortazavi:060_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2831PZHE/",
"accession": "IGVFDO2831PZHE",
"aliases": [
"ali-mortazavi:077_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7007WBAX/",
"accession": "IGVFDO7007WBAX",
"aliases": [
"ali-mortazavi:016_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0813DZTW/",
"accession": "IGVFDO0813DZTW",
"aliases": [
"ali-mortazavi:069_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0853BCOL/",
"accession": "IGVFDO0853BCOL",
"aliases": [
"ali-mortazavi:058_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7610XXRR/",
"accession": "IGVFDO7610XXRR",
"aliases": [
"ali-mortazavi:072_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8958JQIY/",
"accession": "IGVFDO8958JQIY",
"aliases": [
"ali-mortazavi:047_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9199TPBC/",
"accession": "IGVFDO9199TPBC",
"aliases": [
"ali-mortazavi:071_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9340WGNV/",
"accession": "IGVFDO9340WGNV",
"aliases": [
"ali-mortazavi:037_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1744FDIX/",
"accession": "IGVFDO1744FDIX",
"aliases": [
"ali-mortazavi:036_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2292YGGE/",
"accession": "IGVFDO2292YGGE",
"aliases": [
"ali-mortazavi:049_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3762EAWT/",
"accession": "IGVFDO3762EAWT",
"aliases": [
"ali-mortazavi:076_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5258MBVH/",
"accession": "IGVFDO5258MBVH",
"aliases": [
"ali-mortazavi:040_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9202WGJZ/",
"accession": "IGVFDO9202WGJZ",
"aliases": [
"ali-mortazavi:085_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9890MXGN/",
"accession": "IGVFDO9890MXGN",
"aliases": [
"ali-mortazavi:068_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9560CEGZ/",
"accession": "IGVFDO9560CEGZ",
"aliases": [
"ali-mortazavi:061_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9374WXKK/",
"accession": "IGVFDO9374WXKK",
"aliases": [
"ali-mortazavi:028_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6614NNPY/",
"accession": "IGVFDO6614NNPY",
"aliases": [
"ali-mortazavi:089_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0696DMIA/",
"accession": "IGVFDO0696DMIA",
"aliases": [
"ali-mortazavi:057_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8322VYDU/",
"accession": "IGVFDO8322VYDU",
"aliases": [
"ali-mortazavi:093_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2319OUEC/",
"accession": "IGVFDO2319OUEC",
"aliases": [
"ali-mortazavi:045_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5810HOHC/",
"accession": "IGVFDO5810HOHC",
"aliases": [
"ali-mortazavi:064_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2517TXOT/",
"accession": "IGVFDO2517TXOT",
"aliases": [
"ali-mortazavi:092_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0751WQHI/",
"accession": "IGVFDO0751WQHI",
"aliases": [
"ali-mortazavi:080_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5737FRWD/",
"accession": "IGVFDO5737FRWD",
"aliases": [
"ali-mortazavi:081_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3603MEIO/",
"accession": "IGVFDO3603MEIO",
"aliases": [
"ali-mortazavi:084_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4788BIQB/",
"accession": "IGVFDO4788BIQB",
"aliases": [
"ali-mortazavi:020_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0624KKTV/",
"accession": "IGVFDO0624KKTV",
"aliases": [
"ali-mortazavi:030_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7255VZBN/",
"accession": "IGVFDO7255VZBN",
"aliases": [
"ali-mortazavi:062_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6607QZPA/",
"accession": "IGVFDO6607QZPA",
"aliases": [
"ali-mortazavi:050_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7957DMLJ/",
"accession": "IGVFDO7957DMLJ",
"aliases": [
"ali-mortazavi:033_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8904OIIT/",
"accession": "IGVFDO8904OIIT",
"aliases": [
"ali-mortazavi:044_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7254QNQZ/",
"accession": "IGVFDO7254QNQZ",
"aliases": [
"ali-mortazavi:031_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI3756ZINJ/",
"accession": "IGVFFI3756ZINJ",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:31:06.909850+00:00",
"file_format": "fastq",
"file_size": 5394383591,
"href": "/sequence-files/IGVFFI3756ZINJ/@@download/IGVFFI3756ZINJ.fastq.gz",
"md5sum": "5c0c5e97de12711a31e3443e81463987",
"s3_uri": "s3://igvf-files/2023/10/15/d7dd50f2-54ee-4382-a54b-a991624e38cd/IGVFFI3756ZINJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B05_D_nova_N2_L002_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1954IPZV/",
"accession": "IGVFFI1954IPZV",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:38:40.334309+00:00",
"file_format": "fastq",
"file_size": 5302083653,
"href": "/sequence-files/IGVFFI1954IPZV/@@download/IGVFFI1954IPZV.fastq.gz",
"md5sum": "31a65946a83be6522185a8e63e17802b",
"s3_uri": "s3://igvf-files/2023/10/15/a78074d0-86dc-4ddc-90c7-77f0053c1902/IGVFFI1954IPZV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B05_D_nova_N2_L003_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7443ROTJ/",
"accession": "IGVFFI7443ROTJ",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:33:42.414407+00:00",
"file_format": "fastq",
"file_size": 10779851733,
"href": "/sequence-files/IGVFFI7443ROTJ/@@download/IGVFFI7443ROTJ.fastq.gz",
"md5sum": "ef2d44088ea62b9d829d9db9081b5db8",
"s3_uri": "s3://igvf-files/2023/10/15/16f323c3-eb28-4e22-b4c8-19c81fa2032f/IGVFFI7443ROTJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B05_D_nova_N2_L003_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6880XAKF/",
"accession": "IGVFFI6880XAKF",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:45:57.556999+00:00",
"file_format": "fastq",
"file_size": 11545367142,
"href": "/sequence-files/IGVFFI6880XAKF/@@download/IGVFFI6880XAKF.fastq.gz",
"md5sum": "57e9d66683163520a149031277da85f5",
"s3_uri": "s3://igvf-files/2023/10/15/33e86323-f86a-49a0-a6ad-b0dfd3394720/IGVFFI6880XAKF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B05_D_nova_N1_L001_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6400JYXB/",
"accession": "IGVFFI6400JYXB",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:02:17.653714+00:00",
"file_format": "fastq",
"file_size": 11532689911,
"href": "/sequence-files/IGVFFI6400JYXB/@@download/IGVFFI6400JYXB.fastq.gz",
"md5sum": "b03af15b101e6e84b6b3dd33d04ecc80",
"s3_uri": "s3://igvf-files/2023/10/15/99299853-a93c-4475-85e1-bde51199784d/IGVFFI6400JYXB.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B05_D_nova_N1_L003_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9385VMQW/",
"accession": "IGVFFI9385VMQW",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:10:23.358060+00:00",
"file_format": "fastq",
"file_size": 11239813522,
"href": "/sequence-files/IGVFFI9385VMQW/@@download/IGVFFI9385VMQW.fastq.gz",
"md5sum": "02dbe3dbb4814873784d62c845d3e735",
"s3_uri": "s3://igvf-files/2023/10/15/9913dc57-cf18-4a91-825d-1e4d38442e5d/IGVFFI9385VMQW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B05_D_nova_N1_L004_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7272LMNI/",
"accession": "IGVFFI7272LMNI",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:23:31.517956+00:00",
"file_format": "fastq",
"file_size": 5408287735,
"href": "/sequence-files/IGVFFI7272LMNI/@@download/IGVFFI7272LMNI.fastq.gz",
"md5sum": "f58315e48877333f6502ac05caf64cd9",
"s3_uri": "s3://igvf-files/2023/10/15/35574156-d618-4304-9d58-bf1eb8653b13/IGVFFI7272LMNI.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B05_D_nova_N2_L001_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0408FWLR/",
"accession": "IGVFFI0408FWLR",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:54:07.703668+00:00",
"file_format": "fastq",
"file_size": 11437739354,
"href": "/sequence-files/IGVFFI0408FWLR/@@download/IGVFFI0408FWLR.fastq.gz",
"md5sum": "c8801b2da30a24bd5638318f18d4236e",
"s3_uri": "s3://igvf-files/2023/10/15/2e48a79c-196d-4041-8c21-a217292a7568/IGVFFI0408FWLR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B05_D_nova_N1_L002_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1461EMXY/",
"accession": "IGVFFI1461EMXY",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:26:03.991982+00:00",
"file_format": "fastq",
"file_size": 10993224913,
"href": "/sequence-files/IGVFFI1461EMXY/@@download/IGVFFI1461EMXY.fastq.gz",
"md5sum": "7ffbdd885c252f16b063e195a3d4c353",
"s3_uri": "s3://igvf-files/2023/10/15/59ecf9e1-6d9b-4541-a19f-34e45ec76cc1/IGVFFI1461EMXY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B05_D_nova_N2_L002_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4185FNLI/",
"accession": "IGVFFI4185FNLI",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:47:40.749206+00:00",
"file_format": "fastq",
"file_size": 5269382289,
"href": "/sequence-files/IGVFFI4185FNLI/@@download/IGVFFI4185FNLI.fastq.gz",
"md5sum": "fb330f6625d9bdc98db71f3cc65a6d25",
"s3_uri": "s3://igvf-files/2023/10/15/a87b8934-ecff-4917-8d7c-18fd354e1491/IGVFFI4185FNLI.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B05_D_nova_N2_L004_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3535YSVJ/",
"accession": "IGVFFI3535YSVJ",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:59:36.990221+00:00",
"file_format": "fastq",
"file_size": 5658539976,
"href": "/sequence-files/IGVFFI3535YSVJ/@@download/IGVFFI3535YSVJ.fastq.gz",
"md5sum": "c8f665b971e4684d2ada08904a01b478",
"s3_uri": "s3://igvf-files/2023/10/15/618a6545-d69c-4057-8f7c-0998228bfe0a/IGVFFI3535YSVJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B05_D_nova_N1_L002_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3717YAML/",
"accession": "IGVFFI3717YAML",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:07:40.226689+00:00",
"file_format": "fastq",
"file_size": 5659794884,
"href": "/sequence-files/IGVFFI3717YAML/@@download/IGVFFI3717YAML.fastq.gz",
"md5sum": "3e58f25cadb42e40778e271ced8760f8",
"s3_uri": "s3://igvf-files/2023/10/15/c1c36c5f-2605-4a58-b124-8ad35be5e7fe/IGVFFI3717YAML.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B05_D_nova_N1_L003_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1859EBAX/",
"accession": "IGVFFI1859EBAX",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:15:37.873234+00:00",
"file_format": "fastq",
"file_size": 5559586070,
"href": "/sequence-files/IGVFFI1859EBAX/@@download/IGVFFI1859EBAX.fastq.gz",
"md5sum": "d023ace0ea2193facefd73aae89d8e60",
"s3_uri": "s3://igvf-files/2023/10/15/90db224f-b315-4006-a70f-df36a75d6066/IGVFFI1859EBAX.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B05_D_nova_N1_L004_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3891SMKG/",
"accession": "IGVFFI3891SMKG",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:18:20.495376+00:00",
"file_format": "fastq",
"file_size": 10916170761,
"href": "/sequence-files/IGVFFI3891SMKG/@@download/IGVFFI3891SMKG.fastq.gz",
"md5sum": "071e603d906ec7fec2a9ffdfe2e4963d",
"s3_uri": "s3://igvf-files/2023/10/15/9823dcdb-ce26-4ce6-80d2-defcdb30edab/IGVFFI3891SMKG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B05_D_nova_N2_L001_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8099NMRL/",
"accession": "IGVFFI8099NMRL",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T01:41:09.772133+00:00",
"file_format": "fastq",
"file_size": 10716190728,
"href": "/sequence-files/IGVFFI8099NMRL/@@download/IGVFFI8099NMRL.fastq.gz",
"md5sum": "b6694fe37689f0cb0f79d51e3d75cb6b",
"s3_uri": "s3://igvf-files/2023/10/15/c5d02992-e28e-4205-9ef3-c79a60e8545f/IGVFFI8099NMRL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B05_D_nova_N2_L004_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7790XVBX/",
"accession": "IGVFFI7790XVBX",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:51:20.128935+00:00",
"file_format": "fastq",
"file_size": 5732947917,
"href": "/sequence-files/IGVFFI7790XVBX/@@download/IGVFFI7790XVBX.fastq.gz",
"md5sum": "423d17d7f8069de2ec4f224ee50f2733",
"s3_uri": "s3://igvf-files/2023/10/15/65f26e34-a3bd-4efb-9d32-f7f10965a6e2/IGVFFI7790XVBX.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B05_D_nova_N1_L001_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI3234HLQI/",
"accession": "IGVFFI3234HLQI",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:02.122099+00:00",
"file_format": "yaml",
"file_size": 1350,
"href": "/configuration-files/IGVFFI3234HLQI/@@download/IGVFFI3234HLQI.yaml.gz",
"md5sum": "8e929a29a6de4d58367e125451ea119b",
"s3_uri": "s3://igvf-files/2024/09/18/20591fc6-35d8-4baa-8b62-b665503d22a8/IGVFFI3234HLQI.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI8636YVCB/",
"accession": "IGVFFI8636YVCB",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:03.542945+00:00",
"file_format": "yaml",
"file_size": 1352,
"href": "/configuration-files/IGVFFI8636YVCB/@@download/IGVFFI8636YVCB.yaml.gz",
"md5sum": "7cca345209e40c8677686c587dd214c0",
"s3_uri": "s3://igvf-files/2024/09/18/873aa3b6-d33e-4bdc-8fa1-3ef39ded6bc4/IGVFFI8636YVCB.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI6604CHBW/",
"accession": "IGVFFI6604CHBW",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:07.601433+00:00",
"file_format": "yaml",
"file_size": 1350,
"href": "/configuration-files/IGVFFI6604CHBW/@@download/IGVFFI6604CHBW.yaml.gz",
"md5sum": "bfaeafe2eca8a6ca0aba6e222048a3b6",
"s3_uri": "s3://igvf-files/2024/09/18/8bf280b9-ccf8-45f2-a002-71620ad5b834/IGVFFI6604CHBW.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI7945WFIM/",
"accession": "IGVFFI7945WFIM",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:06.357234+00:00",
"file_format": "yaml",
"file_size": 1352,
"href": "/configuration-files/IGVFFI7945WFIM/@@download/IGVFFI7945WFIM.yaml.gz",
"md5sum": "73815d614e6c850acaf8b06334d117f1",
"s3_uri": "s3://igvf-files/2024/09/18/614f510e-c228-4dc6-9af3-d3000938ab7c/IGVFFI7945WFIM.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI5288WGRV/",
"accession": "IGVFFI5288WGRV",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:05.009744+00:00",
"file_format": "yaml",
"file_size": 1353,
"href": "/configuration-files/IGVFFI5288WGRV/@@download/IGVFFI5288WGRV.yaml.gz",
"md5sum": "631f77dd3dad1d735d24ca7fbbe95a6b",
"s3_uri": "s3://igvf-files/2024/09/18/3cb24905-6aef-4921-a8c3-1cbd0a772e6e/IGVFFI5288WGRV.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI5162AZIZ/",
"accession": "IGVFFI5162AZIZ",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:11.170734+00:00",
"file_format": "yaml",
"file_size": 1352,
"href": "/configuration-files/IGVFFI5162AZIZ/@@download/IGVFFI5162AZIZ.yaml.gz",
"md5sum": "c91aadc26e08c80f6f344f3662a80793",
"s3_uri": "s3://igvf-files/2024/09/18/32212b27-ef24-4b0a-a33a-ea5ac4e1324e/IGVFFI5162AZIZ.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI7410YQGZ/",
"accession": "IGVFFI7410YQGZ",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:08.767937+00:00",
"file_format": "yaml",
"file_size": 1352,
"href": "/configuration-files/IGVFFI7410YQGZ/@@download/IGVFFI7410YQGZ.yaml.gz",
"md5sum": "542d4c0659b3958043b6228ac55599af",
"s3_uri": "s3://igvf-files/2024/09/18/1cf57341-99c9-4205-8cfd-9ea53e939205/IGVFFI7410YQGZ.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI7619VMXY/",
"accession": "IGVFFI7619VMXY",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:06:09.969323+00:00",
"file_format": "yaml",
"file_size": 1352,
"href": "/configuration-files/IGVFFI7619VMXY/@@download/IGVFFI7619VMXY.yaml.gz",
"md5sum": "d4f09fd5791191f87c0a542686379cf4",
"s3_uri": "s3://igvf-files/2024/09/18/ec1cd223-375c-43fd-81e9-85a2b18b97bd/IGVFFI7619VMXY.yaml.gz",
"status": "released",
"upload_status": "validated"
}
],
"input_for": [
"/analysis-sets/IGVFDS0531OYMZ/"
],
"lab": {
"@id": "/labs/ali-mortazavi/",
"title": "Ali Mortazavi, UCI"
},
"notes": "Preferred_assay_titles enum Parse Split-seq has been renamed to be Parse SPLiT-seq.",
"onlist_files": [
"/tabular-files/IGVFFI2591OFQO/",
"/tabular-files/IGVFFI1138MCVX/"
],
"onlist_method": "multi",
"preferred_assay_title": "Parse SPLiT-seq",
"protocols": [
"https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-flash-froz-eq2lyj17rlx9/v1",
"https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-flash-froz-n2bvj3noplk5/v2",
"https://www.protocols.io/view/evercode-wt-mega-v2-2-1-8epv5xxrng1b/v1",
"https://www.protocols.io/view/evercode-single-index-pcr-5jyl82k9rl2w/v1"
],
"release_timestamp": "2025-04-19T01:35:47.333956+00:00",
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM3969LFGC/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM3969LFGC",
"aliases": [
"ali-mortazavi:subpool_011_67D"
],
"cellular_sub_pool": "011_67D",
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [],
"institutional_certificates": [],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/NTR_0000646/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "left cerebral cortex",
"term_name": "left cerebral cortex"
},
{
"@id": "/sample-terms/NTR_0000647/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "right cerebral cortex",
"term_name": "right cerebral cortex"
},
{
"@id": "/sample-terms/NTR_0000750/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "left hippocampal formation",
"term_name": "left hippocampal formation"
},
{
"@id": "/sample-terms/NTR_0000751/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "right hippocampal formation",
"term_name": "right hippocampal formation"
},
{
"@id": "/sample-terms/UBERON_0001388/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "gastrocnemius",
"term_name": "gastrocnemius"
}
],
"status": "released",
"summary": "multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus NZO/H1LtJ (male, 69 days) left hippocampal formation tissue; ... and 190 more samples",
"taxa": "Mus musculus",
"treatments": []
}
],
"schema_version": "26",
"sequencing_library_types": [
"mRNA enriched"
],
"status": "released",
"strand_specificity": "5 prime to 3 prime",
"submitted_by": {
"@id": "/users/ebd1025b-e3ab-4e51-bfcd-1415f278281a/",
"title": "Diane Trout"
},
"submitted_files_timestamp": "2023-10-15T00:45:57.556999+00:00",
"summary": "Parse SPLiT-seq",
"uuid": "3d914730-d3d4-4e3d-8687-98cd87ac59d6"
}