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IGVFDS1098YTNX

released
GRU
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 180)
Protocols
Aliases
buenrostro-bernstein:scRNA Lib 363
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
I1
3992
Barcode index
22523KLT3
448 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3956
Barcode index
22523KLT3
418 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3956
Read 2
22523KLT3
520 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
3992
Read 1
22523KLT3
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
3956
Read 1
22523KLT3
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3992
Read 2
22523KLT3
565 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 180)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:scATAC Lib 444
Jason Buenrostro, Broad