{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS1028ZFVQ/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS1028ZFVQ",
"aliases": [
"igvf:corces_measurementSet_X047_G8_ATAC"
],
"assay_term": {
"@id": "/assay-terms/OBI_0002762/",
"assay_slims": [
"chromatin accessibility"
],
"status": "released",
"term_name": "single-nucleus ATAC-seq"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [4fa3d51f-faa7-48b9-b76b-58bbb23ba4cb](/phenotypic-features/4fa3d51f-faa7-48b9-b76b-58bbb23ba4cb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [4a89566b-e6ee-4846-b48a-601a52c201ab](/phenotypic-features/4a89566b-e6ee-4846-b48a-601a52c201ab/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [fc1de29e-57a0-4cdb-ac92-597485b27795](/phenotypic-features/fc1de29e-57a0-4cdb-ac92-597485b27795/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [b1bcbcb3-200c-4716-b4cc-8cc2cc3ee208](/phenotypic-features/b1bcbcb3-200c-4716-b4cc-8cc2cc3ee208/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [9109c230-248d-47c3-9cff-73daf2db597a](/phenotypic-features/9109c230-248d-47c3-9cff-73daf2db597a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8458OKEW](/human-donors/IGVFDO8458OKEW/) has in progress subobject phenotypic feature [3f62e325-e003-4f54-a5ed-1e5ab90bffbb](/phenotypic-features/3f62e325-e003-4f54-a5ed-1e5ab90bffbb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8458OKEW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [5a2e0d6a-6c20-4740-9cc9-f6eb1f00bee8](/phenotypic-features/5a2e0d6a-6c20-4740-9cc9-f6eb1f00bee8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [9306bbc1-b3a4-41f0-8fe3-03e191b98d99](/phenotypic-features/9306bbc1-b3a4-41f0-8fe3-03e191b98d99/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [e82bb1f8-5de0-4d91-84d6-0d77ad1f2bc1](/phenotypic-features/e82bb1f8-5de0-4d91-84d6-0d77ad1f2bc1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [5dc91db6-1de5-4f9b-86fa-9470048ff8fb](/phenotypic-features/5dc91db6-1de5-4f9b-86fa-9470048ff8fb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [ff6e836f-a0c6-4006-981a-358d2d3a7c03](/phenotypic-features/ff6e836f-a0c6-4006-981a-358d2d3a7c03/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3501RYHX](/human-donors/IGVFDO3501RYHX/) has in progress subobject phenotypic feature [8dbc3bc3-9a27-4c5c-8796-75440e1d5e6d](/phenotypic-features/8dbc3bc3-9a27-4c5c-8796-75440e1d5e6d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3501RYHX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [4ce05436-3aba-4ff2-adfe-7b35c9701431](/phenotypic-features/4ce05436-3aba-4ff2-adfe-7b35c9701431/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [cf42e423-497d-4ce1-b16c-de4b75c47c15](/phenotypic-features/cf42e423-497d-4ce1-b16c-de4b75c47c15/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [20ce9114-8f44-47dc-b1ff-6a44688bf47a](/phenotypic-features/20ce9114-8f44-47dc-b1ff-6a44688bf47a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [fcb965cc-7b61-4d20-822d-bd5a898093b5](/phenotypic-features/fcb965cc-7b61-4d20-822d-bd5a898093b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0802OVOD](/human-donors/IGVFDO0802OVOD/) has in progress subobject phenotypic feature [ea3dee25-4ac9-4957-a68d-c098ce615ca3](/phenotypic-features/ea3dee25-4ac9-4957-a68d-c098ce615ca3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0802OVOD/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2031ESZX](/human-donors/IGVFDO2031ESZX/) has in progress subobject phenotypic feature [e4956f7b-f7c0-4081-a17f-b98bace43aac](/phenotypic-features/e4956f7b-f7c0-4081-a17f-b98bace43aac/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2031ESZX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2031ESZX](/human-donors/IGVFDO2031ESZX/) has in progress subobject phenotypic feature [5cce85b5-89b2-4c7b-8a69-d06bd4a563d9](/phenotypic-features/5cce85b5-89b2-4c7b-8a69-d06bd4a563d9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2031ESZX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2031ESZX](/human-donors/IGVFDO2031ESZX/) has in progress subobject phenotypic feature [54f5a511-5d75-41cb-866a-6ee82ddb209b](/phenotypic-features/54f5a511-5d75-41cb-866a-6ee82ddb209b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2031ESZX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2031ESZX](/human-donors/IGVFDO2031ESZX/) has in progress subobject phenotypic feature [db023dab-98aa-456b-b675-32fe8cb67884](/phenotypic-features/db023dab-98aa-456b-b675-32fe8cb67884/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2031ESZX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [03671afd-a812-4641-acd8-ab7ca518f1a5](/phenotypic-features/03671afd-a812-4641-acd8-ab7ca518f1a5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [07bba92c-e0e2-4492-9c8e-07b2afc7b700](/phenotypic-features/07bba92c-e0e2-4492-9c8e-07b2afc7b700/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [18771fd8-b1f4-4112-ac0d-363d231fec46](/phenotypic-features/18771fd8-b1f4-4112-ac0d-363d231fec46/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [a44604d0-0960-4f7f-a9a4-8399f31bfe01](/phenotypic-features/a44604d0-0960-4f7f-a9a4-8399f31bfe01/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [b6e61b30-fc06-4574-bff5-d55b926cf9f3](/phenotypic-features/b6e61b30-fc06-4574-bff5-d55b926cf9f3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2028IGVN](/human-donors/IGVFDO2028IGVN/) has in progress subobject phenotypic feature [f38ae152-a841-4578-80ad-e603838eb149](/phenotypic-features/f38ae152-a841-4578-80ad-e603838eb149/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2028IGVN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7720JNYZ](/human-donors/IGVFDO7720JNYZ/) has in progress subobject phenotypic feature [b8d2bdc8-6429-461f-b00d-b530a631c5a5](/phenotypic-features/b8d2bdc8-6429-461f-b00d-b530a631c5a5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7720JNYZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7720JNYZ](/human-donors/IGVFDO7720JNYZ/) has in progress subobject phenotypic feature [f4679a5f-a8ec-409d-b8fe-b1b20f27d207](/phenotypic-features/f4679a5f-a8ec-409d-b8fe-b1b20f27d207/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7720JNYZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7720JNYZ](/human-donors/IGVFDO7720JNYZ/) has in progress subobject phenotypic feature [86df8b53-cb57-4e34-83a6-c8cf66b85450](/phenotypic-features/86df8b53-cb57-4e34-83a6-c8cf66b85450/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7720JNYZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7720JNYZ](/human-donors/IGVFDO7720JNYZ/) has in progress subobject phenotypic feature [d7589c14-ec5a-4631-8fa0-e2d6776dab9b](/phenotypic-features/d7589c14-ec5a-4631-8fa0-e2d6776dab9b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7720JNYZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7720JNYZ](/human-donors/IGVFDO7720JNYZ/) has in progress subobject phenotypic feature [e21c1b8a-f7fb-4412-93a3-00f24d6280ac](/phenotypic-features/e21c1b8a-f7fb-4412-93a3-00f24d6280ac/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7720JNYZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7720JNYZ](/human-donors/IGVFDO7720JNYZ/) has in progress subobject phenotypic feature [4cf206b1-67ce-4e84-9858-add2a84e81f2](/phenotypic-features/4cf206b1-67ce-4e84-9858-add2a84e81f2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7720JNYZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [842c58cd-8b71-4cd6-a121-989c48f6a757](/phenotypic-features/842c58cd-8b71-4cd6-a121-989c48f6a757/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [4f68640b-3f92-4906-9bac-808001031fbb](/phenotypic-features/4f68640b-3f92-4906-9bac-808001031fbb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [b59c47e4-8549-4b63-95c7-c7b732cd80a1](/phenotypic-features/b59c47e4-8549-4b63-95c7-c7b732cd80a1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [58a6b3f4-d283-4561-a436-8c6d81773bea](/phenotypic-features/58a6b3f4-d283-4561-a436-8c6d81773bea/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [b4968851-2538-49ab-a27e-be55b86b05b9](/phenotypic-features/b4968851-2538-49ab-a27e-be55b86b05b9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5912PIZP](/human-donors/IGVFDO5912PIZP/) has in progress subobject phenotypic feature [580639c7-8b7a-4e04-a362-38b90bb8ccef](/phenotypic-features/580639c7-8b7a-4e04-a362-38b90bb8ccef/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5912PIZP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [905212f3-9a73-48f8-9d8a-bbf1a29e09c2](/phenotypic-features/905212f3-9a73-48f8-9d8a-bbf1a29e09c2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [9a45b193-acc3-4a31-82a8-09bbb5deb7b8](/phenotypic-features/9a45b193-acc3-4a31-82a8-09bbb5deb7b8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [362f11d9-5071-4bde-9bd2-a81f54c82b95](/phenotypic-features/362f11d9-5071-4bde-9bd2-a81f54c82b95/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [51003264-5fb0-442f-9309-d022709f2370](/phenotypic-features/51003264-5fb0-442f-9309-d022709f2370/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [72188cbf-1712-43d0-b0e0-1cc8c4d7b8c7](/phenotypic-features/72188cbf-1712-43d0-b0e0-1cc8c4d7b8c7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7678VYKP](/human-donors/IGVFDO7678VYKP/) has in progress subobject phenotypic feature [0658a11f-70fb-4d39-9234-464658f0788c](/phenotypic-features/0658a11f-70fb-4d39-9234-464658f0788c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7678VYKP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [0130d925-ca8e-441c-a725-9525a350da63](/phenotypic-features/0130d925-ca8e-441c-a725-9525a350da63/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [f2944cd8-3e11-46e3-8dd8-a60165632a59](/phenotypic-features/f2944cd8-3e11-46e3-8dd8-a60165632a59/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [3ea18406-059b-4181-ad35-c617adcf8f07](/phenotypic-features/3ea18406-059b-4181-ad35-c617adcf8f07/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [16dd0641-17b5-4e28-8df8-c1557d69956e](/phenotypic-features/16dd0641-17b5-4e28-8df8-c1557d69956e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0182KXUM](/human-donors/IGVFDO0182KXUM/) has in progress subobject phenotypic feature [4e4146b5-4e97-4a47-87d9-6f1cef053dab](/phenotypic-features/4e4146b5-4e97-4a47-87d9-6f1cef053dab/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0182KXUM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0182KXUM](/human-donors/IGVFDO0182KXUM/) has in progress subobject phenotypic feature [5d950b98-bd86-4aa8-84bf-fae2d618d49e](/phenotypic-features/5d950b98-bd86-4aa8-84bf-fae2d618d49e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0182KXUM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0182KXUM](/human-donors/IGVFDO0182KXUM/) has in progress subobject phenotypic feature [9361c97a-4ecc-45b4-8c36-efa18792f6ca](/phenotypic-features/9361c97a-4ecc-45b4-8c36-efa18792f6ca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0182KXUM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0182KXUM](/human-donors/IGVFDO0182KXUM/) has in progress subobject phenotypic feature [405f5db5-e84e-46ec-b56d-57bef8c1a6d8](/phenotypic-features/405f5db5-e84e-46ec-b56d-57bef8c1a6d8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0182KXUM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [d8416687-8d5b-433e-a553-eb11125a2fa6](/phenotypic-features/d8416687-8d5b-433e-a553-eb11125a2fa6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [0026a1b8-bc9b-4ca3-8550-db33dea01cf2](/phenotypic-features/0026a1b8-bc9b-4ca3-8550-db33dea01cf2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [20739539-1577-4aa9-a16f-e48042d342a1](/phenotypic-features/20739539-1577-4aa9-a16f-e48042d342a1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [be888d35-90a2-4dc6-8192-63ff7c0a544d](/phenotypic-features/be888d35-90a2-4dc6-8192-63ff7c0a544d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [6bbe54ee-eaea-42f2-a7a1-c71e9aef58bc](/phenotypic-features/6bbe54ee-eaea-42f2-a7a1-c71e9aef58bc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9299YLNH](/human-donors/IGVFDO9299YLNH/) has in progress subobject phenotypic feature [9a04e4d1-7a8c-4148-a9fa-9d0cc5b6b156](/phenotypic-features/9a04e4d1-7a8c-4148-a9fa-9d0cc5b6b156/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9299YLNH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [213d8bcb-11ce-4b7f-ae80-8a3e9b73ae83](/phenotypic-features/213d8bcb-11ce-4b7f-ae80-8a3e9b73ae83/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [5c5d17b8-c589-44ff-8c25-ac4b8b32e0fc](/phenotypic-features/5c5d17b8-c589-44ff-8c25-ac4b8b32e0fc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [27767bd2-d2f7-4c12-a080-0891f07591b7](/phenotypic-features/27767bd2-d2f7-4c12-a080-0891f07591b7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5214IKNF](/human-donors/IGVFDO5214IKNF/) has in progress subobject phenotypic feature [b26dcc82-a5c2-42f3-a63e-a43fd9359ebf](/phenotypic-features/b26dcc82-a5c2-42f3-a63e-a43fd9359ebf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5214IKNF/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS1028ZFVQ](/measurement-sets/IGVFDS1028ZFVQ/) has sequence file(s): [IGVFFI7363ZBRH](/sequence-files/IGVFFI7363ZBRH/), [IGVFFI8373COGI](/sequence-files/IGVFFI8373COGI/), [IGVFFI2273MCGG](/sequence-files/IGVFFI2273MCGG/), [IGVFFI0675DMBG](/sequence-files/IGVFFI0675DMBG/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS1028ZFVQ/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS1028ZFVQ](/measurement-sets/IGVFDS1028ZFVQ/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS1028ZFVQ/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS1028ZFVQ](/measurement-sets/IGVFDS1028ZFVQ/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS1028ZFVQ/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T19:47:49.580378+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO5214IKNF/",
"accession": "IGVFDO5214IKNF",
"aliases": [
"igvf:corces_donor_BANN1070"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5912PIZP/",
"accession": "IGVFDO5912PIZP",
"aliases": [
"igvf:corces_donor_BANN1830"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2031ESZX/",
"accession": "IGVFDO2031ESZX",
"aliases": [
"igvf:corces_donor_BANN1037"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1997RFPJ/",
"accession": "IGVFDO1997RFPJ",
"aliases": [
"igvf:corces_donor_BANN1340"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7678VYKP/",
"accession": "IGVFDO7678VYKP",
"aliases": [
"igvf:corces_donor_BANN1235"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8458OKEW/",
"accession": "IGVFDO8458OKEW",
"aliases": [
"igvf:corces_donor_BANN1623"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3501RYHX/",
"accession": "IGVFDO3501RYHX",
"aliases": [
"igvf:corces_donor_BANN1959"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0802OVOD/",
"accession": "IGVFDO0802OVOD",
"aliases": [
"igvf:corces_donor_BANN1030"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0182KXUM/",
"accession": "IGVFDO0182KXUM",
"aliases": [
"igvf:corces_donor_BANN9938"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2028IGVN/",
"accession": "IGVFDO2028IGVN",
"aliases": [
"igvf:corces_donor_BANN1256"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7720JNYZ/",
"accession": "IGVFDO7720JNYZ",
"aliases": [
"igvf:corces_donor_BANN0438"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9299YLNH/",
"accession": "IGVFDO9299YLNH",
"aliases": [
"igvf:corces_donor_BANN1921"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI7363ZBRH/",
"accession": "IGVFFI7363ZBRH",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X047_G8_P049_L001_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:38:00.857305+00:00",
"file_format": "fastq",
"file_size": 6617836869,
"href": "/sequence-files/IGVFFI7363ZBRH/@@download/IGVFFI7363ZBRH.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/167cf0f2-3564-4a34-a443-510a8f7f709b/IGVFFI7363ZBRH.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X047_G8_L008_P049_S4_L001_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8373COGI/",
"accession": "IGVFFI8373COGI",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X047_G8_P049_L001_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:38:03.444363+00:00",
"file_format": "fastq",
"file_size": 4088967144,
"href": "/sequence-files/IGVFFI8373COGI/@@download/IGVFFI8373COGI.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/ed6838eb-9643-45fa-8599-1cbb2f7b1c83/IGVFFI8373COGI.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X047_G8_L008_P049_S4_L001_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2273MCGG/",
"accession": "IGVFFI2273MCGG",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X047_G8_P049_L001_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:37:57.104277+00:00",
"file_format": "fastq",
"file_size": 1593487815,
"href": "/sequence-files/IGVFFI2273MCGG/@@download/IGVFFI2273MCGG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/df37c090-0334-4bb2-ba09-8991370074c6/IGVFFI2273MCGG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X047_G8_L008_P049_S4_L001_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0675DMBG/",
"accession": "IGVFFI0675DMBG",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X047_G8_P049_L001_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T13:38:06.084781+00:00",
"file_format": "fastq",
"file_size": 6770276766,
"href": "/sequence-files/IGVFFI0675DMBG/@@download/IGVFFI0675DMBG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/087152a6-c8dd-4a7b-a269-991fe3f6d4fc/IGVFFI0675DMBG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X047_G8_L008_P049_S4_L001_R3_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI7587TJLC/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS1618GVTK/",
"accession": "IGVFDS1618GVTK",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM1698LTIY/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM1698LTIY",
"aliases": [
"igvf:corces_multiplexedSample_X047_G8"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 78 years) putamen tissue associated with Parkinson's disease, mild cognitive impairment; Homo sapiens (male, 73 years) posterior cingulate gyrus tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T13:37:57.104277+00:00",
"summary": "single-nucleus ATAC-seq (10x multiome)",
"uuid": "899d34b1-8bde-496d-acb5-40f241e1aa91"
}